Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Gm11687-201ENSMUST00000118911 886 ntBASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv29A0A0G2LB96 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv29A0A0G2LB96 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv29A0A0G2LB96 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv29A0A0G2LB96 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.46■□□□□ 0.39
Trbv29A0A0G2LB96 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv29A0A0G2LB96 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv29A0A0G2LB96 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv29A0A0G2LB96 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv29A0A0G2LB96 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.46■□□□□ 0.38
Trbv29A0A0G2LB96 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv29A0A0G2LB96 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv29A0A0G2LB96 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv29A0A0G2LB96 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv29A0A0G2LB96 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv29A0A0G2LB96 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trbv29A0A0G2LB96 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv29A0A0G2LB96 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv29A0A0G2LB96 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv29A0A0G2LB96 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv29A0A0G2LB96 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv29A0A0G2LB96 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv29A0A0G2LB96 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Trbv29A0A0G2LB96 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trbv29A0A0G2LB96 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv29A0A0G2LB96 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv29A0A0G2LB96 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv29A0A0G2LB96 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.43■□□□□ 0.38
Trbv29A0A0G2LB96 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv29A0A0G2LB96 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Trbv29A0A0G2LB96 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv29A0A0G2LB96 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv29A0A0G2LB96 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbv29A0A0G2LB96 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv29A0A0G2LB96 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv29A0A0G2LB96 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv29A0A0G2LB96 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv29A0A0G2LB96 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv29A0A0G2LB96 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trbv29A0A0G2LB96 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv29A0A0G2LB96 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv29A0A0G2LB96 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv29A0A0G2LB96 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv29A0A0G2LB96 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv29A0A0G2LB96 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv29A0A0G2LB96 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trbv29A0A0G2LB96 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv29A0A0G2LB96 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.39■□□□□ 0.37
Trbv29A0A0G2LB96 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv29A0A0G2LB96 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.39■□□□□ 0.37
Trbv29A0A0G2LB96 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv29A0A0G2LB96 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trbv29A0A0G2LB96 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trbv29A0A0G2LB96 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv29A0A0G2LB96 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trbv29A0A0G2LB96 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv29A0A0G2LB96 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv29A0A0G2LB96 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Trbv29A0A0G2LB96 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.38■□□□□ 0.37
Trbv29A0A0G2LB96 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv29A0A0G2LB96 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv29A0A0G2LB96 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv29A0A0G2LB96 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv29A0A0G2LB96 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.37■□□□□ 0.37
Trbv29A0A0G2LB96 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv29A0A0G2LB96 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trbv29A0A0G2LB96 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv29A0A0G2LB96 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv29A0A0G2LB96 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trbv29A0A0G2LB96 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Trbv29A0A0G2LB96 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.36■□□□□ 0.37
Trbv29A0A0G2LB96 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trbv29A0A0G2LB96 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv29A0A0G2LB96 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv29A0A0G2LB96 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv29A0A0G2LB96 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv29A0A0G2LB96 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trbv29A0A0G2LB96 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv29A0A0G2LB96 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.35■□□□□ 0.37
Trbv29A0A0G2LB96 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv29A0A0G2LB96 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms