Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Gm5812-201ENSMUST00000061073 957 ntBASIC16.51■□□□□ 0.23
Trav7-5A0A0G2JFX6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-5A0A0G2JFX6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-5A0A0G2JFX6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-5A0A0G2JFX6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav7-5A0A0G2JFX6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-5A0A0G2JFX6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-5A0A0G2JFX6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav7-5A0A0G2JFX6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-5A0A0G2JFX6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-5A0A0G2JFX6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-5A0A0G2JFX6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-5A0A0G2JFX6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gm10232-201ENSMUST00000089221 720 ntBASIC16.48■□□□□ 0.23
Trav7-5A0A0G2JFX6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-5A0A0G2JFX6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav7-5A0A0G2JFX6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-5A0A0G2JFX6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-5A0A0G2JFX6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-5A0A0G2JFX6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav7-5A0A0G2JFX6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
Trav7-5A0A0G2JFX6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav7-5A0A0G2JFX6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-5A0A0G2JFX6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-5A0A0G2JFX6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Trav7-5A0A0G2JFX6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.46■□□□□ 0.22
Trav7-5A0A0G2JFX6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-5A0A0G2JFX6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-5A0A0G2JFX6 Gm15546-201ENSMUST00000122095 826 ntBASIC16.45■□□□□ 0.22
Trav7-5A0A0G2JFX6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.45■□□□□ 0.22
Trav7-5A0A0G2JFX6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.45■□□□□ 0.22
Trav7-5A0A0G2JFX6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-5A0A0G2JFX6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Trav7-5A0A0G2JFX6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-5A0A0G2JFX6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-5A0A0G2JFX6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav7-5A0A0G2JFX6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-5A0A0G2JFX6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.41■□□□□ 0.22
Trav7-5A0A0G2JFX6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.41■□□□□ 0.22
Trav7-5A0A0G2JFX6 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.41■□□□□ 0.22
Trav7-5A0A0G2JFX6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-5A0A0G2JFX6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-5A0A0G2JFX6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-5A0A0G2JFX6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-5A0A0G2JFX6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-5A0A0G2JFX6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms