Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.43■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.41■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.4■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tcrg-V3A0A0G2JEW2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.38■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.37■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Gm22238-201ENSMUST00000175222 88 ntBASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.35■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.35■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.33■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.33■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tcrg-V3A0A0G2JEW2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tcrg-V3A0A0G2JEW2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms