Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-45A0A0B4J1J1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.8■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.8■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.78■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.78■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv5-45A0A0B4J1J1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Igkv5-45A0A0B4J1J1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-45A0A0B4J1J1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.73■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.72■■□□□ 1.07
Igkv5-45A0A0B4J1J1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv5-45A0A0B4J1J1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-45A0A0B4J1J1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-45A0A0B4J1J1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.7■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-45A0A0B4J1J1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.69■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.67■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.67■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv5-45A0A0B4J1J1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms