Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Trbv20A0A0B4J1H5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv20A0A0B4J1H5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv20A0A0B4J1H5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv20A0A0B4J1H5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Gm6821-201ENSMUST00000107540 542 ntBASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv20A0A0B4J1H5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.78■□□□□ 0.6
Trbv20A0A0B4J1H5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.78■□□□□ 0.6
Trbv20A0A0B4J1H5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv20A0A0B4J1H5 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.77■□□□□ 0.59
Trbv20A0A0B4J1H5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Trbv20A0A0B4J1H5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms