Protein–RNA interactions for Protein: A0A087WR45

Prob1, Proline-rich basic protein 1, mousemouse

Predictions only

Length 1,010 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prob1A0A087WR45 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prob1A0A087WR45 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prob1A0A087WR45 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prob1A0A087WR45 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prob1A0A087WR45 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prob1A0A087WR45 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prob1A0A087WR45 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prob1A0A087WR45 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prob1A0A087WR45 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prob1A0A087WR45 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Prob1A0A087WR45 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prob1A0A087WR45 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prob1A0A087WR45 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prob1A0A087WR45 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prob1A0A087WR45 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prob1A0A087WR45 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Prob1A0A087WR45 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.3■□□□□ 0.84
Prob1A0A087WR45 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prob1A0A087WR45 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.3■□□□□ 0.84
Prob1A0A087WR45 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prob1A0A087WR45 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prob1A0A087WR45 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prob1A0A087WR45 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prob1A0A087WR45 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prob1A0A087WR45 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prob1A0A087WR45 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prob1A0A087WR45 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prob1A0A087WR45 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.29■□□□□ 0.84
Prob1A0A087WR45 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prob1A0A087WR45 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.28■□□□□ 0.84
Prob1A0A087WR45 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.28■□□□□ 0.84
Prob1A0A087WR45 Gm9870-201ENSMUST00000063874 645 ntBASIC20.28■□□□□ 0.84
Prob1A0A087WR45 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prob1A0A087WR45 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prob1A0A087WR45 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Prob1A0A087WR45 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prob1A0A087WR45 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Prob1A0A087WR45 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prob1A0A087WR45 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prob1A0A087WR45 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prob1A0A087WR45 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prob1A0A087WR45 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Prob1A0A087WR45 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.26■□□□□ 0.83
Prob1A0A087WR45 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prob1A0A087WR45 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Prob1A0A087WR45 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prob1A0A087WR45 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prob1A0A087WR45 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.25■□□□□ 0.83
Prob1A0A087WR45 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.25■□□□□ 0.83
Prob1A0A087WR45 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prob1A0A087WR45 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prob1A0A087WR45 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prob1A0A087WR45 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prob1A0A087WR45 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Prob1A0A087WR45 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.24■□□□□ 0.83
Prob1A0A087WR45 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prob1A0A087WR45 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prob1A0A087WR45 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prob1A0A087WR45 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prob1A0A087WR45 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prob1A0A087WR45 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prob1A0A087WR45 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prob1A0A087WR45 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.23■□□□□ 0.83
Prob1A0A087WR45 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prob1A0A087WR45 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prob1A0A087WR45 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prob1A0A087WR45 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.22■□□□□ 0.83
Prob1A0A087WR45 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.22■□□□□ 0.83
Prob1A0A087WR45 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.22■□□□□ 0.83
Prob1A0A087WR45 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Prob1A0A087WR45 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Prob1A0A087WR45 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prob1A0A087WR45 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prob1A0A087WR45 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.21■□□□□ 0.83
Prob1A0A087WR45 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.21■□□□□ 0.83
Prob1A0A087WR45 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prob1A0A087WR45 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prob1A0A087WR45 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prob1A0A087WR45 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Prob1A0A087WR45 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Prob1A0A087WR45 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.2■□□□□ 0.82
Prob1A0A087WR45 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prob1A0A087WR45 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Prob1A0A087WR45 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prob1A0A087WR45 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prob1A0A087WR45 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.2■□□□□ 0.82
Prob1A0A087WR45 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prob1A0A087WR45 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prob1A0A087WR45 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prob1A0A087WR45 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Prob1A0A087WR45 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms