Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav17A0A075B655 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav17A0A075B655 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav17A0A075B655 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav17A0A075B655 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav17A0A075B655 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.67■□□□□ 0.26
Trav17A0A075B655 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav17A0A075B655 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav17A0A075B655 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav17A0A075B655 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav17A0A075B655 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav17A0A075B655 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav17A0A075B655 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.64■□□□□ 0.25
Trav17A0A075B655 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav17A0A075B655 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trav17A0A075B655 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav17A0A075B655 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav17A0A075B655 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav17A0A075B655 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav17A0A075B655 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav17A0A075B655 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav17A0A075B655 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav17A0A075B655 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Trav17A0A075B655 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav17A0A075B655 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav17A0A075B655 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav17A0A075B655 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav17A0A075B655 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav17A0A075B655 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav17A0A075B655 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav17A0A075B655 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.59■□□□□ 0.25
Trav17A0A075B655 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav17A0A075B655 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav17A0A075B655 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav17A0A075B655 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav17A0A075B655 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav17A0A075B655 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav17A0A075B655 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms