Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-4A0A075B631 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-4A0A075B631 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-4A0A075B631 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-4A0A075B631 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav9n-4A0A075B631 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-4A0A075B631 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9n-4A0A075B631 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9n-4A0A075B631 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9n-4A0A075B631 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.29□□□□□ -0.12
Trav9n-4A0A075B631 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav9n-4A0A075B631 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav9n-4A0A075B631 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav9n-4A0A075B631 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9n-4A0A075B631 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.28□□□□□ -0.12
Trav9n-4A0A075B631 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9n-4A0A075B631 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trav9n-4A0A075B631 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9n-4A0A075B631 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9n-4A0A075B631 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9n-4A0A075B631 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9n-4A0A075B631 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9n-4A0A075B631 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav9n-4A0A075B631 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9n-4A0A075B631 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9n-4A0A075B631 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9n-4A0A075B631 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9n-4A0A075B631 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9n-4A0A075B631 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9n-4A0A075B631 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-4A0A075B631 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Gm14523-201ENSMUST00000117260 558 ntBASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-4A0A075B631 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms