Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4d-3A0A075B625 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4d-3A0A075B625 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4d-3A0A075B625 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4d-3A0A075B625 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4d-3A0A075B625 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4d-3A0A075B625 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4d-3A0A075B625 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4d-3A0A075B625 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav4d-3A0A075B625 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4d-3A0A075B625 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav4d-3A0A075B625 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4d-3A0A075B625 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.27□□□□□ -0.13
Trav4d-3A0A075B625 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav4d-3A0A075B625 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav4d-3A0A075B625 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4d-3A0A075B625 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4d-3A0A075B625 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav4d-3A0A075B625 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4d-3A0A075B625 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4d-3A0A075B625 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav4d-3A0A075B625 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4d-3A0A075B625 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4d-3A0A075B625 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4d-3A0A075B625 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4d-3A0A075B625 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4d-3A0A075B625 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Zfp131-205ENSMUST00000223812 663 ntBASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4d-3A0A075B625 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4d-3A0A075B625 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav4d-3A0A075B625 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4d-3A0A075B625 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4d-3A0A075B625 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4d-3A0A075B625 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4d-3A0A075B625 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4d-3A0A075B625 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav4d-3A0A075B625 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav4d-3A0A075B625 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4d-3A0A075B625 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4d-3A0A075B625 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4d-3A0A075B625 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4d-3A0A075B625 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4d-3A0A075B625 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4d-3A0A075B625 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms