Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh17Q9R100 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.67■□□□□ 0.9
Cdh17Q9R100 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh17Q9R100 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh17Q9R100 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh17Q9R100 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh17Q9R100 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.66■□□□□ 0.9
Cdh17Q9R100 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh17Q9R100 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh17Q9R100 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh17Q9R100 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cdh17Q9R100 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh17Q9R100 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh17Q9R100 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh17Q9R100 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Cdh17Q9R100 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh17Q9R100 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh17Q9R100 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh17Q9R100 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cdh17Q9R100 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh17Q9R100 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdh17Q9R100 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdh17Q9R100 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cdh17Q9R100 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.62■□□□□ 0.89
Cdh17Q9R100 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cdh17Q9R100 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh17Q9R100 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh17Q9R100 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh17Q9R100 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh17Q9R100 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cdh17Q9R100 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh17Q9R100 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh17Q9R100 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh17Q9R100 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh17Q9R100 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdh17Q9R100 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh17Q9R100 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdh17Q9R100 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdh17Q9R100 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.61■□□□□ 0.89
Cdh17Q9R100 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdh17Q9R100 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh17Q9R100 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdh17Q9R100 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh17Q9R100 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdh17Q9R100 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdh17Q9R100 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdh17Q9R100 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdh17Q9R100 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh17Q9R100 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh17Q9R100 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh17Q9R100 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh17Q9R100 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdh17Q9R100 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdh17Q9R100 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.58■□□□□ 0.89
Cdh17Q9R100 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.58■□□□□ 0.88
Cdh17Q9R100 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
Cdh17Q9R100 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh17Q9R100 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh17Q9R100 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh17Q9R100 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdh17Q9R100 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh17Q9R100 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh17Q9R100 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh17Q9R100 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh17Q9R100 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh17Q9R100 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdh17Q9R100 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh17Q9R100 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh17Q9R100 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.56■□□□□ 0.88
Cdh17Q9R100 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh17Q9R100 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdh17Q9R100 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh17Q9R100 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh17Q9R100 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh17Q9R100 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdh17Q9R100 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh17Q9R100 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdh17Q9R100 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh17Q9R100 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.55■□□□□ 0.88
Cdh17Q9R100 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.55■□□□□ 0.88
Cdh17Q9R100 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh17Q9R100 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cdh17Q9R100 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms