Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mbd3l1Q9D9H3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Mbd3l1Q9D9H3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mbd3l1Q9D9H3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.33■□□□□ 0.53
Mbd3l1Q9D9H3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mbd3l1Q9D9H3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mbd3l1Q9D9H3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mbd3l1Q9D9H3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mbd3l1Q9D9H3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.33■□□□□ 0.53
Mbd3l1Q9D9H3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mbd3l1Q9D9H3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mbd3l1Q9D9H3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mbd3l1Q9D9H3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mbd3l1Q9D9H3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mbd3l1Q9D9H3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mbd3l1Q9D9H3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mbd3l1Q9D9H3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mbd3l1Q9D9H3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mbd3l1Q9D9H3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mbd3l1Q9D9H3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mbd3l1Q9D9H3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.32■□□□□ 0.52
Mbd3l1Q9D9H3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mbd3l1Q9D9H3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mbd3l1Q9D9H3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mbd3l1Q9D9H3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mbd3l1Q9D9H3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mbd3l1Q9D9H3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mbd3l1Q9D9H3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mbd3l1Q9D9H3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mbd3l1Q9D9H3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.29■□□□□ 0.52
Mbd3l1Q9D9H3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.29■□□□□ 0.52
Mbd3l1Q9D9H3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Mbd3l1Q9D9H3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mbd3l1Q9D9H3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mbd3l1Q9D9H3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mbd3l1Q9D9H3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mbd3l1Q9D9H3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Mbd3l1Q9D9H3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mbd3l1Q9D9H3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mbd3l1Q9D9H3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mbd3l1Q9D9H3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mbd3l1Q9D9H3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mbd3l1Q9D9H3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mbd3l1Q9D9H3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mbd3l1Q9D9H3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Mbd3l1Q9D9H3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mbd3l1Q9D9H3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mbd3l1Q9D9H3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Mbd3l1Q9D9H3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mbd3l1Q9D9H3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.26■□□□□ 0.51
Mbd3l1Q9D9H3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mbd3l1Q9D9H3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.26■□□□□ 0.51
Mbd3l1Q9D9H3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.26■□□□□ 0.51
Mbd3l1Q9D9H3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mbd3l1Q9D9H3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.25■□□□□ 0.51
Mbd3l1Q9D9H3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mbd3l1Q9D9H3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Mbd3l1Q9D9H3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mbd3l1Q9D9H3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Mbd3l1Q9D9H3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Mbd3l1Q9D9H3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.23■□□□□ 0.51
Mbd3l1Q9D9H3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms