Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.6■□□□□ 0.57
Tmem54Q9D7S1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem54Q9D7S1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tmem54Q9D7S1 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.59■□□□□ 0.57
Tmem54Q9D7S1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem54Q9D7S1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Tmem54Q9D7S1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem54Q9D7S1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.59■□□□□ 0.57
Tmem54Q9D7S1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem54Q9D7S1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem54Q9D7S1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Tmem54Q9D7S1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Tmem54Q9D7S1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tmem54Q9D7S1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem54Q9D7S1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem54Q9D7S1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem54Q9D7S1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem54Q9D7S1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem54Q9D7S1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.57■□□□□ 0.56
Tmem54Q9D7S1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.57■□□□□ 0.56
Tmem54Q9D7S1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.57■□□□□ 0.56
Tmem54Q9D7S1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem54Q9D7S1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Gm15546-201ENSMUST00000122095 826 ntBASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem54Q9D7S1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem54Q9D7S1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Gm15820-201ENSMUST00000201566 728 ntBASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem54Q9D7S1 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem54Q9D7S1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tmem54Q9D7S1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Tmem54Q9D7S1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmem54Q9D7S1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tmem54Q9D7S1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem54Q9D7S1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem54Q9D7S1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem54Q9D7S1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem54Q9D7S1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem54Q9D7S1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem54Q9D7S1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Tmem54Q9D7S1 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.48■□□□□ 0.55
Tmem54Q9D7S1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tmem54Q9D7S1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms