Protein–RNA interactions for Protein: Q9CR22

Tmem42, Transmembrane protein 42, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem42Q9CR22 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmem42Q9CR22 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmem42Q9CR22 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmem42Q9CR22 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Tmem42Q9CR22 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tmem42Q9CR22 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tmem42Q9CR22 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tmem42Q9CR22 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tmem42Q9CR22 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tmem42Q9CR22 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.39■□□□□ 0.53
Tmem42Q9CR22 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tmem42Q9CR22 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tmem42Q9CR22 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Tmem42Q9CR22 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Tmem42Q9CR22 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.39■□□□□ 0.53
Tmem42Q9CR22 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Tmem42Q9CR22 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmem42Q9CR22 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tmem42Q9CR22 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.38■□□□□ 0.53
Tmem42Q9CR22 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmem42Q9CR22 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmem42Q9CR22 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Gm7332-201ENSMUST00000118351 454 ntBASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmem42Q9CR22 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tmem42Q9CR22 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.35■□□□□ 0.53
Tmem42Q9CR22 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tmem42Q9CR22 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tmem42Q9CR22 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tmem42Q9CR22 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tmem42Q9CR22 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tmem42Q9CR22 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tmem42Q9CR22 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.33■□□□□ 0.53
Tmem42Q9CR22 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem42Q9CR22 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tmem42Q9CR22 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.32■□□□□ 0.52
Tmem42Q9CR22 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tmem42Q9CR22 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem42Q9CR22 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem42Q9CR22 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem42Q9CR22 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tmem42Q9CR22 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem42Q9CR22 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem42Q9CR22 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tmem42Q9CR22 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.29■□□□□ 0.52
Tmem42Q9CR22 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms