Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm7Q9CQQ8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm7Q9CQQ8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.43■■□□□ 1.02
Lsm7Q9CQQ8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm7Q9CQQ8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.43■■□□□ 1.02
Lsm7Q9CQQ8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Lsm7Q9CQQ8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lsm7Q9CQQ8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm7Q9CQQ8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.42■■□□□ 1.02
Lsm7Q9CQQ8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm7Q9CQQ8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.42■■□□□ 1.02
Lsm7Q9CQQ8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.42■■□□□ 1.02
Lsm7Q9CQQ8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm7Q9CQQ8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm7Q9CQQ8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm7Q9CQQ8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm7Q9CQQ8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.4■■□□□ 1.02
Lsm7Q9CQQ8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lsm7Q9CQQ8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lsm7Q9CQQ8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Lsm7Q9CQQ8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lsm7Q9CQQ8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.39■■□□□ 1.01
Lsm7Q9CQQ8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm7Q9CQQ8 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.39■■□□□ 1.01
Lsm7Q9CQQ8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm7Q9CQQ8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Lsm7Q9CQQ8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm7Q9CQQ8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Lsm7Q9CQQ8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Lsm7Q9CQQ8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.38■■□□□ 1.01
Lsm7Q9CQQ8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsm7Q9CQQ8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.37■■□□□ 1.01
Lsm7Q9CQQ8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lsm7Q9CQQ8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.37■■□□□ 1.01
Lsm7Q9CQQ8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsm7Q9CQQ8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lsm7Q9CQQ8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lsm7Q9CQQ8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lsm7Q9CQQ8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
Lsm7Q9CQQ8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Lsm7Q9CQQ8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 Gm22238-201ENSMUST00000175222 88 ntBASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lsm7Q9CQQ8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.34■■□□□ 1.01
Lsm7Q9CQQ8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Lsm7Q9CQQ8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsm7Q9CQQ8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lsm7Q9CQQ8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lsm7Q9CQQ8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Lsm7Q9CQQ8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Lsm7Q9CQQ8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Lsm7Q9CQQ8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.33■■□□□ 1.01
Lsm7Q9CQQ8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.33■■□□□ 1
Lsm7Q9CQQ8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lsm7Q9CQQ8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Lsm7Q9CQQ8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm7Q9CQQ8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lsm7Q9CQQ8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lsm7Q9CQQ8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.31■■□□□ 1
Lsm7Q9CQQ8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lsm7Q9CQQ8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms