Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Taf11Q99JX1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Taf11Q99JX1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Taf11Q99JX1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Taf11Q99JX1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Taf11Q99JX1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Taf11Q99JX1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Taf11Q99JX1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Taf11Q99JX1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.02■□□□□ 0.8
Taf11Q99JX1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.02■□□□□ 0.8
Taf11Q99JX1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Taf11Q99JX1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.02■□□□□ 0.8
Taf11Q99JX1 Zfp131-205ENSMUST00000223812 663 ntBASIC20.02■□□□□ 0.8
Taf11Q99JX1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Taf11Q99JX1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Taf11Q99JX1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Taf11Q99JX1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Taf11Q99JX1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Taf11Q99JX1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Taf11Q99JX1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Taf11Q99JX1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.01■□□□□ 0.79
Taf11Q99JX1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Taf11Q99JX1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Taf11Q99JX1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Taf11Q99JX1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20■□□□□ 0.79
Taf11Q99JX1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Taf11Q99JX1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Taf11Q99JX1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Taf11Q99JX1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Taf11Q99JX1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Taf11Q99JX1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Taf11Q99JX1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Taf11Q99JX1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Taf11Q99JX1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Taf11Q99JX1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Taf11Q99JX1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Taf11Q99JX1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Taf11Q99JX1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Taf11Q99JX1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Taf11Q99JX1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Taf11Q99JX1 Gm22567-201ENSMUST00000175542 342 ntBASIC19.98■□□□□ 0.79
Taf11Q99JX1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.98■□□□□ 0.79
Taf11Q99JX1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Taf11Q99JX1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Taf11Q99JX1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Taf11Q99JX1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Taf11Q99JX1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Taf11Q99JX1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Taf11Q99JX1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Taf11Q99JX1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Taf11Q99JX1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Taf11Q99JX1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Taf11Q99JX1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Taf11Q99JX1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Taf11Q99JX1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Taf11Q99JX1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Taf11Q99JX1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Gm24970-201ENSMUST00000175582 82 ntBASIC19.94■□□□□ 0.78
Taf11Q99JX1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Taf11Q99JX1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Taf11Q99JX1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.94■□□□□ 0.78
Taf11Q99JX1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Taf11Q99JX1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Taf11Q99JX1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Taf11Q99JX1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.93■□□□□ 0.78
Taf11Q99JX1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Taf11Q99JX1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.93■□□□□ 0.78
Taf11Q99JX1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Taf11Q99JX1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Taf11Q99JX1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Taf11Q99JX1 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.92■□□□□ 0.78
Taf11Q99JX1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Taf11Q99JX1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Taf11Q99JX1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Taf11Q99JX1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.91■□□□□ 0.78
Taf11Q99JX1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Taf11Q99JX1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Taf11Q99JX1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Taf11Q99JX1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Taf11Q99JX1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Taf11Q99JX1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Taf11Q99JX1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Taf11Q99JX1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Taf11Q99JX1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Taf11Q99JX1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms