Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8VDP2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q8VDP2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q8VDP2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q8VDP2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q8VDP2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Q8VDP2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.5■□□□□ 0.87
Q8VDP2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q8VDP2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Q8VDP2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q8VDP2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q8VDP2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q8VDP2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q8VDP2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q8VDP2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q8VDP2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Q8VDP2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q8VDP2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q8VDP2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q8VDP2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Q8VDP2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Q8VDP2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Q8VDP2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Q8VDP2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.47■□□□□ 0.87
Q8VDP2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Q8VDP2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8VDP2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8VDP2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8VDP2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Q8VDP2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8VDP2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8VDP2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Q8VDP2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Q8VDP2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Q8VDP2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.44■□□□□ 0.86
Q8VDP2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8VDP2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8VDP2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8VDP2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Q8VDP2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Q8VDP2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8VDP2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8VDP2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Q8VDP2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Q8VDP2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.43■□□□□ 0.86
Q8VDP2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Q8VDP2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Q8VDP2 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.42■□□□□ 0.86
Q8VDP2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Q8VDP2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8VDP2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Q8VDP2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8VDP2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8VDP2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.41■□□□□ 0.86
Q8VDP2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8VDP2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.41■□□□□ 0.86
Q8VDP2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Q8VDP2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Q8VDP2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8VDP2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Q8VDP2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.4■□□□□ 0.86
Q8VDP2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8VDP2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.4■□□□□ 0.86
Q8VDP2 Rarb-207ENSMUST00000225921 2756 ntBASIC20.4■□□□□ 0.86
Q8VDP2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8VDP2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Q8VDP2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8VDP2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Q8VDP2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Q8VDP2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Q8VDP2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Q8VDP2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q8VDP2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.38■□□□□ 0.85
Q8VDP2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q8VDP2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Q8VDP2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Q8VDP2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q8VDP2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.38■□□□□ 0.85
Q8VDP2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q8VDP2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8VDP2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.37■□□□□ 0.85
Q8VDP2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8VDP2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.37■□□□□ 0.85
Q8VDP2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8VDP2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8VDP2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8VDP2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Q8VDP2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Q8VDP2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Q8VDP2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8VDP2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8VDP2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms