Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Rps24-207ENSMUST00000224568 714 ntBASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rpp40Q8R1F9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rpp40Q8R1F9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpp40Q8R1F9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpp40Q8R1F9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpp40Q8R1F9 Gm45102-201ENSMUST00000207427 857 ntBASIC22.81■■□□□ 1.24
Rpp40Q8R1F9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Rpp40Q8R1F9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpp40Q8R1F9 Gm14117-201ENSMUST00000122417 843 ntBASIC22.8■■□□□ 1.24
Rpp40Q8R1F9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Rpp40Q8R1F9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.8■■□□□ 1.24
Rpp40Q8R1F9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rpp40Q8R1F9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rpp40Q8R1F9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Rpp40Q8R1F9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rpp40Q8R1F9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rpp40Q8R1F9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rpp40Q8R1F9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.79■■□□□ 1.24
Rpp40Q8R1F9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rpp40Q8R1F9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rpp40Q8R1F9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rpp40Q8R1F9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rpp40Q8R1F9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.78■■□□□ 1.24
Rpp40Q8R1F9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rpp40Q8R1F9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpp40Q8R1F9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rpp40Q8R1F9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.77■■□□□ 1.23
Rpp40Q8R1F9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Etf1-202ENSMUST00000180351 108 ntBASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Gm10399-202ENSMUST00000202768 748 ntBASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Rpp40Q8R1F9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpp40Q8R1F9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rpp40Q8R1F9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rpp40Q8R1F9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Gm40881-201ENSMUST00000223397 166 ntBASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rpp40Q8R1F9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpp40Q8R1F9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpp40Q8R1F9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.73■■□□□ 1.23
Rpp40Q8R1F9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.73■■□□□ 1.23
Rpp40Q8R1F9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpp40Q8R1F9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rpp40Q8R1F9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpp40Q8R1F9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Rpp40Q8R1F9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpp40Q8R1F9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpp40Q8R1F9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpp40Q8R1F9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.7■■□□□ 1.22
Rpp40Q8R1F9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Rpp40Q8R1F9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rpp40Q8R1F9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpp40Q8R1F9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
Rpp40Q8R1F9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Rpp40Q8R1F9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
Rpp40Q8R1F9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpp40Q8R1F9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Rpp40Q8R1F9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Rpp40Q8R1F9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms