Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.04■■□□□ 1.6
Cchcr1Q8K2I2 Gm12504-201ENSMUST00000120860 2231 ntBASIC25.04■■□□□ 1.6
Cchcr1Q8K2I2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cchcr1Q8K2I2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
Cchcr1Q8K2I2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cchcr1Q8K2I2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cchcr1Q8K2I2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Gm12366-201ENSMUST00000121722 873 ntBASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Gm5786-201ENSMUST00000085368 882 ntBASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cchcr1Q8K2I2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Cchcr1Q8K2I2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cchcr1Q8K2I2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cchcr1Q8K2I2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Cchcr1Q8K2I2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Cchcr1Q8K2I2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cchcr1Q8K2I2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cchcr1Q8K2I2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Cchcr1Q8K2I2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Cchcr1Q8K2I2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25■■□□□ 1.59
Cchcr1Q8K2I2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cchcr1Q8K2I2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Cchcr1Q8K2I2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Cchcr1Q8K2I2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.98■■□□□ 1.59
Cchcr1Q8K2I2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cchcr1Q8K2I2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cchcr1Q8K2I2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cchcr1Q8K2I2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cchcr1Q8K2I2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24.98■■□□□ 1.59
Cchcr1Q8K2I2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cchcr1Q8K2I2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cchcr1Q8K2I2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Cchcr1Q8K2I2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cchcr1Q8K2I2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cchcr1Q8K2I2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.96■■□□□ 1.59
Cchcr1Q8K2I2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cchcr1Q8K2I2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cchcr1Q8K2I2 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.96■■□□□ 1.59
Cchcr1Q8K2I2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cchcr1Q8K2I2 Gm10420-201ENSMUST00000121713 882 ntBASIC24.95■■□□□ 1.58
Cchcr1Q8K2I2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Cchcr1Q8K2I2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cchcr1Q8K2I2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Cchcr1Q8K2I2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cchcr1Q8K2I2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Cchcr1Q8K2I2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cchcr1Q8K2I2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Cchcr1Q8K2I2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cchcr1Q8K2I2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cchcr1Q8K2I2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.93■■□□□ 1.58
Cchcr1Q8K2I2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cchcr1Q8K2I2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Cchcr1Q8K2I2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Cchcr1Q8K2I2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Cchcr1Q8K2I2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Cchcr1Q8K2I2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Cchcr1Q8K2I2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Cchcr1Q8K2I2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cchcr1Q8K2I2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cchcr1Q8K2I2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.91■■□□□ 1.58
Cchcr1Q8K2I2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Cchcr1Q8K2I2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cchcr1Q8K2I2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cchcr1Q8K2I2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Cchcr1Q8K2I2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cchcr1Q8K2I2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cchcr1Q8K2I2 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.9■■□□□ 1.58
Cchcr1Q8K2I2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Cchcr1Q8K2I2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cchcr1Q8K2I2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.9■■□□□ 1.58
Cchcr1Q8K2I2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Cchcr1Q8K2I2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms