Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sox30Q8CGW4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.35■■□□□ 1.33
Sox30Q8CGW4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.35■■□□□ 1.33
Sox30Q8CGW4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sox30Q8CGW4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Sox30Q8CGW4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Sox30Q8CGW4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sox30Q8CGW4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sox30Q8CGW4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sox30Q8CGW4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Sox30Q8CGW4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sox30Q8CGW4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sox30Q8CGW4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sox30Q8CGW4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.33■■□□□ 1.33
Sox30Q8CGW4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sox30Q8CGW4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sox30Q8CGW4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sox30Q8CGW4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sox30Q8CGW4 Gm16437-201ENSMUST00000025669 507 ntBASIC23.32■■□□□ 1.32
Sox30Q8CGW4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sox30Q8CGW4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sox30Q8CGW4 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.31■■□□□ 1.32
Sox30Q8CGW4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sox30Q8CGW4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Sox30Q8CGW4 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.31■■□□□ 1.32
Sox30Q8CGW4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sox30Q8CGW4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Sox30Q8CGW4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sox30Q8CGW4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sox30Q8CGW4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sox30Q8CGW4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sox30Q8CGW4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sox30Q8CGW4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.29■■□□□ 1.32
Sox30Q8CGW4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.29■■□□□ 1.32
Sox30Q8CGW4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sox30Q8CGW4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Sox30Q8CGW4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sox30Q8CGW4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sox30Q8CGW4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sox30Q8CGW4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sox30Q8CGW4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Sox30Q8CGW4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Sox30Q8CGW4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sox30Q8CGW4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Sox30Q8CGW4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sox30Q8CGW4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sox30Q8CGW4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sox30Q8CGW4 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.26■■□□□ 1.31
Sox30Q8CGW4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sox30Q8CGW4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sox30Q8CGW4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sox30Q8CGW4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sox30Q8CGW4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sox30Q8CGW4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sox30Q8CGW4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
Sox30Q8CGW4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sox30Q8CGW4 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.24■■□□□ 1.31
Sox30Q8CGW4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sox30Q8CGW4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Sox30Q8CGW4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sox30Q8CGW4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sox30Q8CGW4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sox30Q8CGW4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sox30Q8CGW4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sox30Q8CGW4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Sox30Q8CGW4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sox30Q8CGW4 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.21■■□□□ 1.31
Sox30Q8CGW4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sox30Q8CGW4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms