Protein–RNA interactions for Protein: Q8CCG1

Zc2hc1c, Zinc finger C2HC domain-containing protein 1C, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc2hc1cQ8CCG1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zc2hc1cQ8CCG1 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.59■■□□□ 1.05
Zc2hc1cQ8CCG1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Zc2hc1cQ8CCG1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Zc2hc1cQ8CCG1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Zc2hc1cQ8CCG1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Zc2hc1cQ8CCG1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Zc2hc1cQ8CCG1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.57■■□□□ 1.04
Zc2hc1cQ8CCG1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Gm13241-201ENSMUST00000094493 780 ntBASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zc2hc1cQ8CCG1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Zc2hc1cQ8CCG1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Zc2hc1cQ8CCG1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Zc2hc1cQ8CCG1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.54■■□□□ 1.04
Zc2hc1cQ8CCG1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.54■■□□□ 1.04
Zc2hc1cQ8CCG1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Zc2hc1cQ8CCG1 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.54■■□□□ 1.04
Zc2hc1cQ8CCG1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
Zc2hc1cQ8CCG1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Zc2hc1cQ8CCG1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.53■■□□□ 1.04
Zc2hc1cQ8CCG1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Zc2hc1cQ8CCG1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.53■■□□□ 1.04
Zc2hc1cQ8CCG1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Zc2hc1cQ8CCG1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zc2hc1cQ8CCG1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Zc2hc1cQ8CCG1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.52■■□□□ 1.04
Zc2hc1cQ8CCG1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.52■■□□□ 1.04
Zc2hc1cQ8CCG1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Zc2hc1cQ8CCG1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zc2hc1cQ8CCG1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.52■■□□□ 1.03
Zc2hc1cQ8CCG1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zc2hc1cQ8CCG1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Zc2hc1cQ8CCG1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.51■■□□□ 1.03
Zc2hc1cQ8CCG1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.51■■□□□ 1.03
Zc2hc1cQ8CCG1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zc2hc1cQ8CCG1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zc2hc1cQ8CCG1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc2hc1cQ8CCG1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc2hc1cQ8CCG1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Zc2hc1cQ8CCG1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Zc2hc1cQ8CCG1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Zc2hc1cQ8CCG1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.49■■□□□ 1.03
Zc2hc1cQ8CCG1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.49■■□□□ 1.03
Zc2hc1cQ8CCG1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.49■■□□□ 1.03
Zc2hc1cQ8CCG1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc2hc1cQ8CCG1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.48■■□□□ 1.03
Zc2hc1cQ8CCG1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Zc2hc1cQ8CCG1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zc2hc1cQ8CCG1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc2hc1cQ8CCG1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc2hc1cQ8CCG1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc2hc1cQ8CCG1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc2hc1cQ8CCG1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc2hc1cQ8CCG1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc2hc1cQ8CCG1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms