Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SynpoQ8CC35 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SynpoQ8CC35 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SynpoQ8CC35 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SynpoQ8CC35 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SynpoQ8CC35 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SynpoQ8CC35 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SynpoQ8CC35 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SynpoQ8CC35 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SynpoQ8CC35 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SynpoQ8CC35 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SynpoQ8CC35 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SynpoQ8CC35 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SynpoQ8CC35 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SynpoQ8CC35 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SynpoQ8CC35 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SynpoQ8CC35 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SynpoQ8CC35 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SynpoQ8CC35 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.31■□□□□ 0.84
SynpoQ8CC35 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SynpoQ8CC35 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SynpoQ8CC35 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SynpoQ8CC35 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SynpoQ8CC35 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SynpoQ8CC35 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SynpoQ8CC35 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SynpoQ8CC35 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SynpoQ8CC35 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SynpoQ8CC35 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SynpoQ8CC35 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SynpoQ8CC35 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SynpoQ8CC35 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.29■□□□□ 0.84
SynpoQ8CC35 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SynpoQ8CC35 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SynpoQ8CC35 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SynpoQ8CC35 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SynpoQ8CC35 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SynpoQ8CC35 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.28■□□□□ 0.84
SynpoQ8CC35 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.28■□□□□ 0.84
SynpoQ8CC35 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.28■□□□□ 0.84
SynpoQ8CC35 Gm45102-201ENSMUST00000207427 857 ntBASIC20.28■□□□□ 0.84
SynpoQ8CC35 Gm10232-201ENSMUST00000089221 720 ntBASIC20.28■□□□□ 0.84
SynpoQ8CC35 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SynpoQ8CC35 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
SynpoQ8CC35 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.27■□□□□ 0.84
SynpoQ8CC35 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SynpoQ8CC35 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.27■□□□□ 0.84
SynpoQ8CC35 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.27■□□□□ 0.84
SynpoQ8CC35 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SynpoQ8CC35 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SynpoQ8CC35 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SynpoQ8CC35 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SynpoQ8CC35 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SynpoQ8CC35 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.26■□□□□ 0.83
SynpoQ8CC35 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SynpoQ8CC35 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SynpoQ8CC35 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SynpoQ8CC35 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SynpoQ8CC35 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynpoQ8CC35 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.25■□□□□ 0.83
SynpoQ8CC35 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.25■□□□□ 0.83
SynpoQ8CC35 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.25■□□□□ 0.83
SynpoQ8CC35 Gm14117-201ENSMUST00000122417 843 ntBASIC20.25■□□□□ 0.83
SynpoQ8CC35 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynpoQ8CC35 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynpoQ8CC35 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynpoQ8CC35 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.25■□□□□ 0.83
SynpoQ8CC35 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynpoQ8CC35 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynpoQ8CC35 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SynpoQ8CC35 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SynpoQ8CC35 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynpoQ8CC35 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SynpoQ8CC35 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SynpoQ8CC35 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynpoQ8CC35 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SynpoQ8CC35 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.24■□□□□ 0.83
SynpoQ8CC35 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynpoQ8CC35 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SynpoQ8CC35 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SynpoQ8CC35 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynpoQ8CC35 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynpoQ8CC35 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynpoQ8CC35 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SynpoQ8CC35 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SynpoQ8CC35 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms