Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Brat1Q8C3R1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.39■■□□□ 1.17
Brat1Q8C3R1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.39■■□□□ 1.17
Brat1Q8C3R1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Brat1Q8C3R1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Brat1Q8C3R1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Brat1Q8C3R1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Brat1Q8C3R1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.38■■□□□ 1.17
Brat1Q8C3R1 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.38■■□□□ 1.17
Brat1Q8C3R1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Brat1Q8C3R1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Brat1Q8C3R1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Brat1Q8C3R1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Brat1Q8C3R1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Brat1Q8C3R1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.37■■□□□ 1.17
Brat1Q8C3R1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Brat1Q8C3R1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Brat1Q8C3R1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Brat1Q8C3R1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Brat1Q8C3R1 Gm10399-202ENSMUST00000202768 748 ntBASIC22.35■■□□□ 1.17
Brat1Q8C3R1 Gm9959-201ENSMUST00000068277 390 ntBASIC22.35■■□□□ 1.17
Brat1Q8C3R1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Brat1Q8C3R1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Brat1Q8C3R1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Brat1Q8C3R1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Brat1Q8C3R1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Brat1Q8C3R1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Brat1Q8C3R1 Rps24-207ENSMUST00000224568 714 ntBASIC22.34■■□□□ 1.17
Brat1Q8C3R1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Brat1Q8C3R1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.33■■□□□ 1.17
Brat1Q8C3R1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Brat1Q8C3R1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.32■■□□□ 1.16
Brat1Q8C3R1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Brat1Q8C3R1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Brat1Q8C3R1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Brat1Q8C3R1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Brat1Q8C3R1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Brat1Q8C3R1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.31■■□□□ 1.16
Brat1Q8C3R1 Gm45102-201ENSMUST00000207427 857 ntBASIC22.31■■□□□ 1.16
Brat1Q8C3R1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Brat1Q8C3R1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.31■■□□□ 1.16
Brat1Q8C3R1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Brat1Q8C3R1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Brat1Q8C3R1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Brat1Q8C3R1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Brat1Q8C3R1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.3■■□□□ 1.16
Brat1Q8C3R1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Brat1Q8C3R1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Brat1Q8C3R1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Brat1Q8C3R1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Brat1Q8C3R1 Gm40881-201ENSMUST00000223397 166 ntBASIC22.29■■□□□ 1.16
Brat1Q8C3R1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Brat1Q8C3R1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.29■■□□□ 1.16
Brat1Q8C3R1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Brat1Q8C3R1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Brat1Q8C3R1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Brat1Q8C3R1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Etf1-202ENSMUST00000180351 108 ntBASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Brat1Q8C3R1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Gm14117-201ENSMUST00000122417 843 ntBASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.27■■□□□ 1.16
Brat1Q8C3R1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Brat1Q8C3R1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Brat1Q8C3R1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.26■■□□□ 1.15
Brat1Q8C3R1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms