Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smndc1Q8BGT7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smndc1Q8BGT7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smndc1Q8BGT7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smndc1Q8BGT7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smndc1Q8BGT7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smndc1Q8BGT7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smndc1Q8BGT7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smndc1Q8BGT7 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.28■□□□□ 0.84
Smndc1Q8BGT7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smndc1Q8BGT7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.28■□□□□ 0.84
Smndc1Q8BGT7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smndc1Q8BGT7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smndc1Q8BGT7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smndc1Q8BGT7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smndc1Q8BGT7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smndc1Q8BGT7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smndc1Q8BGT7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smndc1Q8BGT7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smndc1Q8BGT7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smndc1Q8BGT7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Smndc1Q8BGT7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smndc1Q8BGT7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smndc1Q8BGT7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Smndc1Q8BGT7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smndc1Q8BGT7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smndc1Q8BGT7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smndc1Q8BGT7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smndc1Q8BGT7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.26■□□□□ 0.83
Smndc1Q8BGT7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smndc1Q8BGT7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smndc1Q8BGT7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Smndc1Q8BGT7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smndc1Q8BGT7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smndc1Q8BGT7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smndc1Q8BGT7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smndc1Q8BGT7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Golph3-202ENSMUST00000226517 2359 ntBASIC20.22■□□□□ 0.83
Smndc1Q8BGT7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smndc1Q8BGT7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smndc1Q8BGT7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smndc1Q8BGT7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smndc1Q8BGT7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smndc1Q8BGT7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.21■□□□□ 0.83
Smndc1Q8BGT7 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.2■□□□□ 0.82
Smndc1Q8BGT7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smndc1Q8BGT7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smndc1Q8BGT7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smndc1Q8BGT7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smndc1Q8BGT7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smndc1Q8BGT7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smndc1Q8BGT7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smndc1Q8BGT7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.19■□□□□ 0.82
Smndc1Q8BGT7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smndc1Q8BGT7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Smndc1Q8BGT7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.19■□□□□ 0.82
Smndc1Q8BGT7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smndc1Q8BGT7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smndc1Q8BGT7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smndc1Q8BGT7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smndc1Q8BGT7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smndc1Q8BGT7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.18■□□□□ 0.82
Smndc1Q8BGT7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.18■□□□□ 0.82
Smndc1Q8BGT7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smndc1Q8BGT7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms