Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Usp6nlQ80XC3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Usp6nlQ80XC3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp6nlQ80XC3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp6nlQ80XC3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.56■■□□□ 1.36
Usp6nlQ80XC3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Usp6nlQ80XC3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Usp6nlQ80XC3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Usp6nlQ80XC3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.55■■□□□ 1.36
Usp6nlQ80XC3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp6nlQ80XC3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp6nlQ80XC3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Usp6nlQ80XC3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Usp6nlQ80XC3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp6nlQ80XC3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp6nlQ80XC3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp6nlQ80XC3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Usp6nlQ80XC3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Usp6nlQ80XC3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Usp6nlQ80XC3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
Usp6nlQ80XC3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Usp6nlQ80XC3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.53■■□□□ 1.36
Usp6nlQ80XC3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp6nlQ80XC3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.53■■□□□ 1.36
Usp6nlQ80XC3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp6nlQ80XC3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Usp6nlQ80XC3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.52■■□□□ 1.36
Usp6nlQ80XC3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp6nlQ80XC3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp6nlQ80XC3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.52■■□□□ 1.36
Usp6nlQ80XC3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp6nlQ80XC3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Usp6nlQ80XC3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp6nlQ80XC3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Usp6nlQ80XC3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp6nlQ80XC3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Usp6nlQ80XC3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Usp6nlQ80XC3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Usp6nlQ80XC3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp6nlQ80XC3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp6nlQ80XC3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Usp6nlQ80XC3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp6nlQ80XC3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp6nlQ80XC3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Usp6nlQ80XC3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.49■■□□□ 1.35
Usp6nlQ80XC3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Usp6nlQ80XC3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp6nlQ80XC3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp6nlQ80XC3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp6nlQ80XC3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Usp6nlQ80XC3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Usp6nlQ80XC3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Usp6nlQ80XC3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Usp6nlQ80XC3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Usp6nlQ80XC3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Usp6nlQ80XC3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Usp6nlQ80XC3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Usp6nlQ80XC3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.46■■□□□ 1.35
Usp6nlQ80XC3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Usp6nlQ80XC3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Usp6nlQ80XC3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.46■■□□□ 1.35
Usp6nlQ80XC3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Usp6nlQ80XC3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Usp6nlQ80XC3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp6nlQ80XC3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp6nlQ80XC3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp6nlQ80XC3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Usp6nlQ80XC3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Usp6nlQ80XC3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.44■■□□□ 1.34
Usp6nlQ80XC3 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.44■■□□□ 1.34
Usp6nlQ80XC3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Usp6nlQ80XC3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.43■■□□□ 1.34
Usp6nlQ80XC3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.43■■□□□ 1.34
Usp6nlQ80XC3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.43■■□□□ 1.34
Usp6nlQ80XC3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Usp6nlQ80XC3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.43■■□□□ 1.34
Usp6nlQ80XC3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Usp6nlQ80XC3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Usp6nlQ80XC3 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.42■■□□□ 1.34
Usp6nlQ80XC3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.42■■□□□ 1.34
Usp6nlQ80XC3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Usp6nlQ80XC3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Usp6nlQ80XC3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.41■■□□□ 1.34
Usp6nlQ80XC3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Usp6nlQ80XC3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Usp6nlQ80XC3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Usp6nlQ80XC3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Usp6nlQ80XC3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Usp6nlQ80XC3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.4■■□□□ 1.34
Usp6nlQ80XC3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Usp6nlQ80XC3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Usp6nlQ80XC3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Usp6nlQ80XC3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Usp6nlQ80XC3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Usp6nlQ80XC3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Usp6nlQ80XC3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Usp6nlQ80XC3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Usp6nlQ80XC3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Usp6nlQ80XC3 Gm9870-201ENSMUST00000063874 645 ntBASIC23.39■■□□□ 1.33
Usp6nlQ80XC3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms