Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 Gm40881-201ENSMUST00000223397 166 ntBASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh8Q7TSK3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdh8Q7TSK3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh8Q7TSK3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcdh8Q7TSK3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh8Q7TSK3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh8Q7TSK3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh8Q7TSK3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh8Q7TSK3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pcdh8Q7TSK3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh8Q7TSK3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh8Q7TSK3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdh8Q7TSK3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdh8Q7TSK3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdh8Q7TSK3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh8Q7TSK3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh8Q7TSK3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdh8Q7TSK3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh8Q7TSK3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh8Q7TSK3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh8Q7TSK3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh8Q7TSK3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdh8Q7TSK3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdh8Q7TSK3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh8Q7TSK3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh8Q7TSK3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh8Q7TSK3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.83■□□□□ 0.93
Pcdh8Q7TSK3 Gm10399-202ENSMUST00000202768 748 ntBASIC20.83■□□□□ 0.93
Pcdh8Q7TSK3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.83■□□□□ 0.93
Pcdh8Q7TSK3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh8Q7TSK3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Pcdh8Q7TSK3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh8Q7TSK3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh8Q7TSK3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh8Q7TSK3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh8Q7TSK3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh8Q7TSK3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh8Q7TSK3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pcdh8Q7TSK3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh8Q7TSK3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh8Q7TSK3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh8Q7TSK3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdh8Q7TSK3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pcdh8Q7TSK3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh8Q7TSK3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh8Q7TSK3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh8Q7TSK3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdh8Q7TSK3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh8Q7TSK3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdh8Q7TSK3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh8Q7TSK3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdh8Q7TSK3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh8Q7TSK3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh8Q7TSK3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdh8Q7TSK3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh8Q7TSK3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdh8Q7TSK3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh8Q7TSK3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdh8Q7TSK3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh8Q7TSK3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdh8Q7TSK3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh8Q7TSK3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh8Q7TSK3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh8Q7TSK3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh8Q7TSK3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh8Q7TSK3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdh8Q7TSK3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh8Q7TSK3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh8Q7TSK3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdh8Q7TSK3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh8Q7TSK3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdh8Q7TSK3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms