Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp200Q6P4T2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp200Q6P4T2 Gm10399-202ENSMUST00000202768 748 ntBASIC20.2■□□□□ 0.82
Snrnp200Q6P4T2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp200Q6P4T2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp200Q6P4T2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp200Q6P4T2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp200Q6P4T2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp200Q6P4T2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp200Q6P4T2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.19■□□□□ 0.82
Snrnp200Q6P4T2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp200Q6P4T2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Snrnp200Q6P4T2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp200Q6P4T2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Snrnp200Q6P4T2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.18■□□□□ 0.82
Snrnp200Q6P4T2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp200Q6P4T2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Snrnp200Q6P4T2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp200Q6P4T2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp200Q6P4T2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Snrnp200Q6P4T2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Snrnp200Q6P4T2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.17■□□□□ 0.82
Snrnp200Q6P4T2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp200Q6P4T2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp200Q6P4T2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp200Q6P4T2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Snrnp200Q6P4T2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Snrnp200Q6P4T2 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp200Q6P4T2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp200Q6P4T2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.12■□□□□ 0.81
Snrnp200Q6P4T2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snrnp200Q6P4T2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snrnp200Q6P4T2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.12■□□□□ 0.81
Snrnp200Q6P4T2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Snrnp200Q6P4T2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Snrnp200Q6P4T2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Snrnp200Q6P4T2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp200Q6P4T2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Snrnp200Q6P4T2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.11■□□□□ 0.81
Snrnp200Q6P4T2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp200Q6P4T2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.11■□□□□ 0.81
Snrnp200Q6P4T2 Rps24-207ENSMUST00000224568 714 ntBASIC20.11■□□□□ 0.81
Snrnp200Q6P4T2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp200Q6P4T2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.1■□□□□ 0.81
Snrnp200Q6P4T2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp200Q6P4T2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp200Q6P4T2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp200Q6P4T2 Gm45102-201ENSMUST00000207427 857 ntBASIC20.1■□□□□ 0.81
Snrnp200Q6P4T2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp200Q6P4T2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp200Q6P4T2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.09■□□□□ 0.81
Snrnp200Q6P4T2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snrnp200Q6P4T2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snrnp200Q6P4T2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Snrnp200Q6P4T2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snrnp200Q6P4T2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.09■□□□□ 0.81
Snrnp200Q6P4T2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Snrnp200Q6P4T2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snrnp200Q6P4T2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Snrnp200Q6P4T2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Snrnp200Q6P4T2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.08■□□□□ 0.81
Snrnp200Q6P4T2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Snrnp200Q6P4T2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Snrnp200Q6P4T2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Snrnp200Q6P4T2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Snrnp200Q6P4T2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp200Q6P4T2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.07■□□□□ 0.8
Snrnp200Q6P4T2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp200Q6P4T2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp200Q6P4T2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp200Q6P4T2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp200Q6P4T2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp200Q6P4T2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Snrnp200Q6P4T2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Snrnp200Q6P4T2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms