Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.42■□□□□ 0.86
VcanQ62059 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VcanQ62059 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.41■□□□□ 0.86
VcanQ62059 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VcanQ62059 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VcanQ62059 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.41■□□□□ 0.86
VcanQ62059 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VcanQ62059 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VcanQ62059 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VcanQ62059 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VcanQ62059 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VcanQ62059 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VcanQ62059 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VcanQ62059 Mir7075-201ENSMUST00000184187 82 ntBASIC20.39■□□□□ 0.86
VcanQ62059 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VcanQ62059 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VcanQ62059 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.39■□□□□ 0.85
VcanQ62059 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VcanQ62059 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
VcanQ62059 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VcanQ62059 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
VcanQ62059 Gm43137-201ENSMUST00000198052 594 ntBASIC20.38■□□□□ 0.85
VcanQ62059 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VcanQ62059 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VcanQ62059 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VcanQ62059 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VcanQ62059 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VcanQ62059 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VcanQ62059 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VcanQ62059 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VcanQ62059 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.35■□□□□ 0.85
VcanQ62059 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VcanQ62059 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VcanQ62059 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VcanQ62059 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VcanQ62059 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VcanQ62059 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.34■□□□□ 0.85
VcanQ62059 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VcanQ62059 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VcanQ62059 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
VcanQ62059 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
VcanQ62059 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
VcanQ62059 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
VcanQ62059 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
VcanQ62059 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VcanQ62059 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
VcanQ62059 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VcanQ62059 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
VcanQ62059 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VcanQ62059 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VcanQ62059 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VcanQ62059 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VcanQ62059 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
VcanQ62059 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
VcanQ62059 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VcanQ62059 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VcanQ62059 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.32■□□□□ 0.84
VcanQ62059 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.32■□□□□ 0.84
VcanQ62059 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.32■□□□□ 0.84
VcanQ62059 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VcanQ62059 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.32■□□□□ 0.84
VcanQ62059 Gm42642-201ENSMUST00000200683 355 ntBASIC20.32■□□□□ 0.84
VcanQ62059 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VcanQ62059 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VcanQ62059 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VcanQ62059 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VcanQ62059 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
VcanQ62059 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VcanQ62059 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.31■□□□□ 0.84
VcanQ62059 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VcanQ62059 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VcanQ62059 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VcanQ62059 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VcanQ62059 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.3■□□□□ 0.84
VcanQ62059 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.3■□□□□ 0.84
VcanQ62059 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VcanQ62059 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VcanQ62059 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VcanQ62059 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VcanQ62059 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
VcanQ62059 Gm10493-201ENSMUST00000097270 612 ntBASIC20.3■□□□□ 0.84
VcanQ62059 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VcanQ62059 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VcanQ62059 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VcanQ62059 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VcanQ62059 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.29■□□□□ 0.84
VcanQ62059 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VcanQ62059 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.29■□□□□ 0.84
VcanQ62059 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VcanQ62059 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VcanQ62059 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VcanQ62059 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.27■□□□□ 0.84
VcanQ62059 Gm10252-201ENSMUST00000209541 832 ntBASIC20.27■□□□□ 0.84
VcanQ62059 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VcanQ62059 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VcanQ62059 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
VcanQ62059 Gm43173-201ENSMUST00000202246 593 ntBASIC20.27■□□□□ 0.84
VcanQ62059 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VcanQ62059 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VcanQ62059 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms