Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.61■■□□□ 1.37
Ddx4Q61496 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx4Q61496 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Ddx4Q61496 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx4Q61496 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx4Q61496 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Ddx4Q61496 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.6■■□□□ 1.37
Ddx4Q61496 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Ddx4Q61496 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx4Q61496 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx4Q61496 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx4Q61496 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx4Q61496 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Ddx4Q61496 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx4Q61496 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx4Q61496 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx4Q61496 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx4Q61496 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx4Q61496 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Ddx4Q61496 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx4Q61496 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx4Q61496 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx4Q61496 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx4Q61496 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx4Q61496 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ddx4Q61496 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx4Q61496 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx4Q61496 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
Ddx4Q61496 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.57■■□□□ 1.36
Ddx4Q61496 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.57■■□□□ 1.36
Ddx4Q61496 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.57■■□□□ 1.36
Ddx4Q61496 Gm6139-201ENSMUST00000079261 882 ntBASIC23.57■■□□□ 1.36
Ddx4Q61496 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx4Q61496 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx4Q61496 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx4Q61496 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx4Q61496 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx4Q61496 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx4Q61496 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx4Q61496 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.56■■□□□ 1.36
Ddx4Q61496 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx4Q61496 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx4Q61496 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx4Q61496 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.56■■□□□ 1.36
Ddx4Q61496 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.56■■□□□ 1.36
Ddx4Q61496 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx4Q61496 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.55■■□□□ 1.36
Ddx4Q61496 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.55■■□□□ 1.36
Ddx4Q61496 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx4Q61496 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.54■■□□□ 1.36
Ddx4Q61496 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.54■■□□□ 1.36
Ddx4Q61496 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
Ddx4Q61496 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx4Q61496 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx4Q61496 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ddx4Q61496 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Ddx4Q61496 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx4Q61496 Gm29257-201ENSMUST00000186115 639 ntBASIC23.53■■□□□ 1.36
Ddx4Q61496 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Ddx4Q61496 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
Ddx4Q61496 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx4Q61496 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.51■■□□□ 1.35
Ddx4Q61496 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Ddx4Q61496 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
Ddx4Q61496 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Ddx4Q61496 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx4Q61496 Gm9870-201ENSMUST00000063874 645 ntBASIC23.51■■□□□ 1.35
Ddx4Q61496 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx4Q61496 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx4Q61496 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx4Q61496 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx4Q61496 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.5■■□□□ 1.35
Ddx4Q61496 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx4Q61496 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.5■■□□□ 1.35
Ddx4Q61496 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.5■■□□□ 1.35
Ddx4Q61496 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx4Q61496 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Ddx4Q61496 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx4Q61496 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx4Q61496 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Ddx4Q61496 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx4Q61496 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx4Q61496 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx4Q61496 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Ddx4Q61496 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.48■■□□□ 1.35
Ddx4Q61496 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx4Q61496 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx4Q61496 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Ddx4Q61496 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Ddx4Q61496 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx4Q61496 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Ddx4Q61496 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx4Q61496 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.47■■□□□ 1.35
Ddx4Q61496 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.47■■□□□ 1.35
Ddx4Q61496 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx4Q61496 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx4Q61496 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx4Q61496 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx4Q61496 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Ddx4Q61496 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 173.1 ms