Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Shroom1Q5SX79 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shroom1Q5SX79 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Shroom1Q5SX79 Gm22238-201ENSMUST00000175222 88 ntBASIC22.58■■□□□ 1.21
Shroom1Q5SX79 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.58■■□□□ 1.21
Shroom1Q5SX79 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Shroom1Q5SX79 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Shroom1Q5SX79 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Shroom1Q5SX79 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Shroom1Q5SX79 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Shroom1Q5SX79 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Shroom1Q5SX79 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Shroom1Q5SX79 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Shroom1Q5SX79 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Shroom1Q5SX79 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shroom1Q5SX79 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.56■■□□□ 1.2
Shroom1Q5SX79 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.56■■□□□ 1.2
Shroom1Q5SX79 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shroom1Q5SX79 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Shroom1Q5SX79 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Shroom1Q5SX79 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shroom1Q5SX79 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shroom1Q5SX79 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Shroom1Q5SX79 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.55■■□□□ 1.2
Shroom1Q5SX79 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Shroom1Q5SX79 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Shroom1Q5SX79 Gm13241-201ENSMUST00000094493 780 ntBASIC22.53■■□□□ 1.2
Shroom1Q5SX79 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shroom1Q5SX79 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Shroom1Q5SX79 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.51■■□□□ 1.19
Shroom1Q5SX79 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shroom1Q5SX79 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Shroom1Q5SX79 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shroom1Q5SX79 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shroom1Q5SX79 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shroom1Q5SX79 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Shroom1Q5SX79 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Shroom1Q5SX79 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shroom1Q5SX79 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shroom1Q5SX79 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Shroom1Q5SX79 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shroom1Q5SX79 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Shroom1Q5SX79 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Shroom1Q5SX79 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shroom1Q5SX79 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shroom1Q5SX79 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.49■■□□□ 1.19
Shroom1Q5SX79 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shroom1Q5SX79 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Shroom1Q5SX79 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Shroom1Q5SX79 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.48■■□□□ 1.19
Shroom1Q5SX79 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.48■■□□□ 1.19
Shroom1Q5SX79 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Shroom1Q5SX79 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Shroom1Q5SX79 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Shroom1Q5SX79 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Shroom1Q5SX79 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Gm9847-201ENSMUST00000052528 599 ntBASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Shroom1Q5SX79 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Shroom1Q5SX79 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.46■■□□□ 1.19
Shroom1Q5SX79 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shroom1Q5SX79 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shroom1Q5SX79 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shroom1Q5SX79 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Shroom1Q5SX79 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Shroom1Q5SX79 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
Shroom1Q5SX79 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shroom1Q5SX79 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shroom1Q5SX79 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Shroom1Q5SX79 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Shroom1Q5SX79 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shroom1Q5SX79 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Shroom1Q5SX79 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Shroom1Q5SX79 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shroom1Q5SX79 Gm12922-201ENSMUST00000120626 809 ntBASIC22.44■■□□□ 1.18
Shroom1Q5SX79 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shroom1Q5SX79 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.44■■□□□ 1.18
Shroom1Q5SX79 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Shroom1Q5SX79 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shroom1Q5SX79 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shroom1Q5SX79 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Shroom1Q5SX79 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms