Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Clhc1Q5M6W3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Clhc1Q5M6W3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Clhc1Q5M6W3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clhc1Q5M6W3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clhc1Q5M6W3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clhc1Q5M6W3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clhc1Q5M6W3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clhc1Q5M6W3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clhc1Q5M6W3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clhc1Q5M6W3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clhc1Q5M6W3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clhc1Q5M6W3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clhc1Q5M6W3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Clhc1Q5M6W3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clhc1Q5M6W3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Gm11687-201ENSMUST00000118911 886 ntBASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Gm16437-201ENSMUST00000025669 507 ntBASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clhc1Q5M6W3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clhc1Q5M6W3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clhc1Q5M6W3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clhc1Q5M6W3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clhc1Q5M6W3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Clhc1Q5M6W3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Clhc1Q5M6W3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clhc1Q5M6W3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clhc1Q5M6W3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Clhc1Q5M6W3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clhc1Q5M6W3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clhc1Q5M6W3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clhc1Q5M6W3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clhc1Q5M6W3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clhc1Q5M6W3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clhc1Q5M6W3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clhc1Q5M6W3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clhc1Q5M6W3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Clhc1Q5M6W3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clhc1Q5M6W3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Clhc1Q5M6W3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clhc1Q5M6W3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clhc1Q5M6W3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clhc1Q5M6W3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Clhc1Q5M6W3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clhc1Q5M6W3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clhc1Q5M6W3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clhc1Q5M6W3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clhc1Q5M6W3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.24■□□□□ 0.83
Clhc1Q5M6W3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clhc1Q5M6W3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clhc1Q5M6W3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clhc1Q5M6W3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Clhc1Q5M6W3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clhc1Q5M6W3 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.23■□□□□ 0.83
Clhc1Q5M6W3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clhc1Q5M6W3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clhc1Q5M6W3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Clhc1Q5M6W3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clhc1Q5M6W3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clhc1Q5M6W3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clhc1Q5M6W3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clhc1Q5M6W3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clhc1Q5M6W3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clhc1Q5M6W3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clhc1Q5M6W3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clhc1Q5M6W3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clhc1Q5M6W3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clhc1Q5M6W3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clhc1Q5M6W3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clhc1Q5M6W3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clhc1Q5M6W3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clhc1Q5M6W3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clhc1Q5M6W3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clhc1Q5M6W3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Clhc1Q5M6W3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clhc1Q5M6W3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clhc1Q5M6W3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clhc1Q5M6W3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clhc1Q5M6W3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clhc1Q5M6W3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.19■□□□□ 0.82
Clhc1Q5M6W3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clhc1Q5M6W3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clhc1Q5M6W3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms