Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam196aQ3USH1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam196aQ3USH1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Fam196aQ3USH1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Fam196aQ3USH1 Gm27011-201ENSMUST00000182352 972 ntBASIC21.62■■□□□ 1.05
Fam196aQ3USH1 Gm27405-201ENSMUST00000184201 112 ntBASIC21.62■■□□□ 1.05
Fam196aQ3USH1 Gm42569-201ENSMUST00000200539 472 ntBASIC21.62■■□□□ 1.05
Fam196aQ3USH1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fam196aQ3USH1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Fam196aQ3USH1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fam196aQ3USH1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.61■■□□□ 1.05
Fam196aQ3USH1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fam196aQ3USH1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.61■■□□□ 1.05
Fam196aQ3USH1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fam196aQ3USH1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.6■■□□□ 1.05
Fam196aQ3USH1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Fam196aQ3USH1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Fam196aQ3USH1 Gm9870-201ENSMUST00000063874 645 ntBASIC21.59■■□□□ 1.05
Fam196aQ3USH1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fam196aQ3USH1 Gm26571-201ENSMUST00000181399 666 ntBASIC21.58■■□□□ 1.05
Fam196aQ3USH1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.58■■□□□ 1.05
Fam196aQ3USH1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.58■■□□□ 1.05
Fam196aQ3USH1 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.58■■□□□ 1.05
Fam196aQ3USH1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fam196aQ3USH1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Fam196aQ3USH1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Fam196aQ3USH1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fam196aQ3USH1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Fam196aQ3USH1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.56■■□□□ 1.04
Fam196aQ3USH1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fam196aQ3USH1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam196aQ3USH1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Fam196aQ3USH1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Fam196aQ3USH1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Fam196aQ3USH1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.55■■□□□ 1.04
Fam196aQ3USH1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.54■■□□□ 1.04
Fam196aQ3USH1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam196aQ3USH1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Fam196aQ3USH1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.54■■□□□ 1.04
Fam196aQ3USH1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam196aQ3USH1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Fam196aQ3USH1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Fam196aQ3USH1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam196aQ3USH1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Fam196aQ3USH1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.53■■□□□ 1.04
Fam196aQ3USH1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Fam196aQ3USH1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam196aQ3USH1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Fam196aQ3USH1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.52■■□□□ 1.04
Fam196aQ3USH1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Fam196aQ3USH1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Fam196aQ3USH1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
Fam196aQ3USH1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.51■■□□□ 1.03
Fam196aQ3USH1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.51■■□□□ 1.03
Fam196aQ3USH1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Fam196aQ3USH1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam196aQ3USH1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Fam196aQ3USH1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Fam196aQ3USH1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Fam196aQ3USH1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Fam196aQ3USH1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.5■■□□□ 1.03
Fam196aQ3USH1 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.5■■□□□ 1.03
Fam196aQ3USH1 Gm10493-201ENSMUST00000097270 612 ntBASIC21.5■■□□□ 1.03
Fam196aQ3USH1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Fam196aQ3USH1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Fam196aQ3USH1 Gm37179-201ENSMUST00000194862 823 ntBASIC21.49■■□□□ 1.03
Fam196aQ3USH1 Gm43173-201ENSMUST00000202246 593 ntBASIC21.49■■□□□ 1.03
Fam196aQ3USH1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Fam196aQ3USH1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms