Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q3U1D9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q3U1D9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q3U1D9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Q3U1D9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.4■□□□□ 0.54
Q3U1D9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q3U1D9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.39■□□□□ 0.53
Q3U1D9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Q3U1D9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Q3U1D9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.39■□□□□ 0.53
Q3U1D9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q3U1D9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Q3U1D9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q3U1D9 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.38■□□□□ 0.53
Q3U1D9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q3U1D9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q3U1D9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q3U1D9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.38■□□□□ 0.53
Q3U1D9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q3U1D9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q3U1D9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q3U1D9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Q3U1D9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.37■□□□□ 0.53
Q3U1D9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q3U1D9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.37■□□□□ 0.53
Q3U1D9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q3U1D9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q3U1D9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Q3U1D9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q3U1D9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q3U1D9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Q3U1D9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Q3U1D9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.36■□□□□ 0.53
Q3U1D9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q3U1D9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.36■□□□□ 0.53
Q3U1D9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Q3U1D9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q3U1D9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q3U1D9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Q3U1D9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q3U1D9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q3U1D9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q3U1D9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q3U1D9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q3U1D9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q3U1D9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q3U1D9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Q3U1D9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Q3U1D9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q3U1D9 Gm9847-201ENSMUST00000052528 599 ntBASIC18.34■□□□□ 0.53
Q3U1D9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q3U1D9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q3U1D9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q3U1D9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q3U1D9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q3U1D9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q3U1D9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Q3U1D9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q3U1D9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q3U1D9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q3U1D9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.33■□□□□ 0.52
Q3U1D9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q3U1D9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Q3U1D9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Q3U1D9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q3U1D9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q3U1D9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q3U1D9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q3U1D9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.32■□□□□ 0.52
Q3U1D9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q3U1D9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q3U1D9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q3U1D9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Q3U1D9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q3U1D9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Q3U1D9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Q3U1D9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q3U1D9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q3U1D9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q3U1D9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
Q3U1D9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.31■□□□□ 0.52
Q3U1D9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q3U1D9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q3U1D9 Gm12922-201ENSMUST00000120626 809 ntBASIC18.3■□□□□ 0.52
Q3U1D9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Q3U1D9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q3U1D9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Q3U1D9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q3U1D9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q3U1D9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q3U1D9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms