Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 Gm10399-202ENSMUST00000202768 748 ntBASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 Gm40881-201ENSMUST00000223397 166 ntBASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.3■■□□□ 1
Shcbp1lQ3TTP0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shcbp1lQ3TTP0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shcbp1lQ3TTP0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.28■■□□□ 1
Shcbp1lQ3TTP0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.28■■□□□ 1
Shcbp1lQ3TTP0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.28■■□□□ 1
Shcbp1lQ3TTP0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Shcbp1lQ3TTP0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.28■■□□□ 1
Shcbp1lQ3TTP0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shcbp1lQ3TTP0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Shcbp1lQ3TTP0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shcbp1lQ3TTP0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Shcbp1lQ3TTP0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Shcbp1lQ3TTP0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shcbp1lQ3TTP0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shcbp1lQ3TTP0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shcbp1lQ3TTP0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shcbp1lQ3TTP0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shcbp1lQ3TTP0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shcbp1lQ3TTP0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shcbp1lQ3TTP0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shcbp1lQ3TTP0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Shcbp1lQ3TTP0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shcbp1lQ3TTP0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Shcbp1lQ3TTP0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shcbp1lQ3TTP0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Shcbp1lQ3TTP0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shcbp1lQ3TTP0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Shcbp1lQ3TTP0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Shcbp1lQ3TTP0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shcbp1lQ3TTP0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.23■□□□□ 0.99
Shcbp1lQ3TTP0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Shcbp1lQ3TTP0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shcbp1lQ3TTP0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shcbp1lQ3TTP0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shcbp1lQ3TTP0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shcbp1lQ3TTP0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Shcbp1lQ3TTP0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shcbp1lQ3TTP0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Shcbp1lQ3TTP0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Shcbp1lQ3TTP0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Shcbp1lQ3TTP0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Shcbp1lQ3TTP0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.21■□□□□ 0.99
Shcbp1lQ3TTP0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Shcbp1lQ3TTP0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shcbp1lQ3TTP0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Shcbp1lQ3TTP0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shcbp1lQ3TTP0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shcbp1lQ3TTP0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shcbp1lQ3TTP0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shcbp1lQ3TTP0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Shcbp1lQ3TTP0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.18■□□□□ 0.98
Shcbp1lQ3TTP0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.18■□□□□ 0.98
Shcbp1lQ3TTP0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.18■□□□□ 0.98
Shcbp1lQ3TTP0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Shcbp1lQ3TTP0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Shcbp1lQ3TTP0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms