Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc4Q3TCX3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.04■□□□□ 0.8
Khdc4Q3TCX3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc4Q3TCX3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Khdc4Q3TCX3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Khdc4Q3TCX3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Khdc4Q3TCX3 Gm7417-201ENSMUST00000192950 473 ntBASIC20.02■□□□□ 0.8
Khdc4Q3TCX3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Khdc4Q3TCX3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Khdc4Q3TCX3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Khdc4Q3TCX3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Khdc4Q3TCX3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Khdc4Q3TCX3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Khdc4Q3TCX3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Khdc4Q3TCX3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Khdc4Q3TCX3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Khdc4Q3TCX3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Khdc4Q3TCX3 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.01■□□□□ 0.79
Khdc4Q3TCX3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Khdc4Q3TCX3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Khdc4Q3TCX3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Khdc4Q3TCX3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Khdc4Q3TCX3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Khdc4Q3TCX3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.98■□□□□ 0.79
Khdc4Q3TCX3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Khdc4Q3TCX3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Khdc4Q3TCX3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Khdc4Q3TCX3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Khdc4Q3TCX3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Khdc4Q3TCX3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Khdc4Q3TCX3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Khdc4Q3TCX3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc4Q3TCX3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.95■□□□□ 0.78
Khdc4Q3TCX3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Khdc4Q3TCX3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Khdc4Q3TCX3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Khdc4Q3TCX3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Khdc4Q3TCX3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Khdc4Q3TCX3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Khdc4Q3TCX3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Khdc4Q3TCX3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms