Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.58■□□□□ 0.4
Trim63Q38HM4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim63Q38HM4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim63Q38HM4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.58■□□□□ 0.4
Trim63Q38HM4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim63Q38HM4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim63Q38HM4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim63Q38HM4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim63Q38HM4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim63Q38HM4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim63Q38HM4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim63Q38HM4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim63Q38HM4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim63Q38HM4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim63Q38HM4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim63Q38HM4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim63Q38HM4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim63Q38HM4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim63Q38HM4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim63Q38HM4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim63Q38HM4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Trim63Q38HM4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim63Q38HM4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.54■□□□□ 0.4
Trim63Q38HM4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim63Q38HM4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim63Q38HM4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Trim63Q38HM4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim63Q38HM4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim63Q38HM4 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.53■□□□□ 0.4
Trim63Q38HM4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim63Q38HM4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim63Q38HM4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim63Q38HM4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim63Q38HM4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim63Q38HM4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim63Q38HM4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim63Q38HM4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim63Q38HM4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Trim63Q38HM4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim63Q38HM4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim63Q38HM4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim63Q38HM4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim63Q38HM4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim63Q38HM4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim63Q38HM4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Trim63Q38HM4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim63Q38HM4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim63Q38HM4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim63Q38HM4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim63Q38HM4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim63Q38HM4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim63Q38HM4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim63Q38HM4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim63Q38HM4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim63Q38HM4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms