Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col10a1Q05306 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col10a1Q05306 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col10a1Q05306 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col10a1Q05306 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.51■□□□□ 0.71
Col10a1Q05306 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col10a1Q05306 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Col10a1Q05306 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Col10a1Q05306 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col10a1Q05306 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
Col10a1Q05306 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Col10a1Q05306 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col10a1Q05306 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.5■□□□□ 0.71
Col10a1Q05306 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Col10a1Q05306 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Col10a1Q05306 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col10a1Q05306 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col10a1Q05306 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col10a1Q05306 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.49■□□□□ 0.71
Col10a1Q05306 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col10a1Q05306 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col10a1Q05306 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col10a1Q05306 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col10a1Q05306 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.49■□□□□ 0.71
Col10a1Q05306 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col10a1Q05306 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.49■□□□□ 0.71
Col10a1Q05306 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Col10a1Q05306 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.49■□□□□ 0.71
Col10a1Q05306 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col10a1Q05306 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col10a1Q05306 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col10a1Q05306 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Col10a1Q05306 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Col10a1Q05306 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col10a1Q05306 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col10a1Q05306 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col10a1Q05306 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col10a1Q05306 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Col10a1Q05306 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.47■□□□□ 0.71
Col10a1Q05306 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Col10a1Q05306 Gm5812-201ENSMUST00000061073 957 ntBASIC19.47■□□□□ 0.71
Col10a1Q05306 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col10a1Q05306 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col10a1Q05306 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col10a1Q05306 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col10a1Q05306 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.46■□□□□ 0.71
Col10a1Q05306 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.46■□□□□ 0.71
Col10a1Q05306 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col10a1Q05306 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col10a1Q05306 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Col10a1Q05306 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col10a1Q05306 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col10a1Q05306 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col10a1Q05306 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col10a1Q05306 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col10a1Q05306 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.45■□□□□ 0.7
Col10a1Q05306 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Col10a1Q05306 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col10a1Q05306 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col10a1Q05306 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col10a1Q05306 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col10a1Q05306 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.44■□□□□ 0.7
Col10a1Q05306 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.44■□□□□ 0.7
Col10a1Q05306 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col10a1Q05306 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col10a1Q05306 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col10a1Q05306 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col10a1Q05306 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col10a1Q05306 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col10a1Q05306 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col10a1Q05306 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.43■□□□□ 0.7
Col10a1Q05306 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col10a1Q05306 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Col10a1Q05306 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
Col10a1Q05306 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Col10a1Q05306 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col10a1Q05306 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col10a1Q05306 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col10a1Q05306 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col10a1Q05306 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.42■□□□□ 0.7
Col10a1Q05306 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col10a1Q05306 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.42■□□□□ 0.7
Col10a1Q05306 Gm10232-201ENSMUST00000089221 720 ntBASIC19.42■□□□□ 0.7
Col10a1Q05306 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col10a1Q05306 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.42■□□□□ 0.7
Col10a1Q05306 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col10a1Q05306 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col10a1Q05306 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Col10a1Q05306 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.41■□□□□ 0.7
Col10a1Q05306 Gm15820-201ENSMUST00000201566 728 ntBASIC19.41■□□□□ 0.7
Col10a1Q05306 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms