Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd3P97770 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd3P97770 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Thumpd3P97770 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd3P97770 Gm44428-201ENSMUST00000204474 874 ntBASIC21.41■■□□□ 1.02
Thumpd3P97770 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd3P97770 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd3P97770 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
Thumpd3P97770 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Thumpd3P97770 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Thumpd3P97770 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.4■■□□□ 1.02
Thumpd3P97770 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Thumpd3P97770 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.4■■□□□ 1.02
Thumpd3P97770 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Thumpd3P97770 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Thumpd3P97770 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Thumpd3P97770 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.39■■□□□ 1.02
Thumpd3P97770 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Thumpd3P97770 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Thumpd3P97770 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Thumpd3P97770 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Thumpd3P97770 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Thumpd3P97770 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Thumpd3P97770 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Thumpd3P97770 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Thumpd3P97770 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Thumpd3P97770 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Thumpd3P97770 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Thumpd3P97770 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Thumpd3P97770 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Thumpd3P97770 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Thumpd3P97770 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Thumpd3P97770 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.37■■□□□ 1.01
Thumpd3P97770 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Thumpd3P97770 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Thumpd3P97770 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Thumpd3P97770 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.36■■□□□ 1.01
Thumpd3P97770 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Thumpd3P97770 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
Thumpd3P97770 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Thumpd3P97770 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Thumpd3P97770 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.35■■□□□ 1.01
Thumpd3P97770 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Thumpd3P97770 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Thumpd3P97770 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Thumpd3P97770 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Thumpd3P97770 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.35■■□□□ 1.01
Thumpd3P97770 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Thumpd3P97770 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Thumpd3P97770 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Thumpd3P97770 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Thumpd3P97770 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Thumpd3P97770 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.34■■□□□ 1.01
Thumpd3P97770 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.34■■□□□ 1.01
Thumpd3P97770 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Thumpd3P97770 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Thumpd3P97770 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Thumpd3P97770 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Thumpd3P97770 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Thumpd3P97770 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Thumpd3P97770 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd3P97770 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Thumpd3P97770 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd3P97770 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd3P97770 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd3P97770 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd3P97770 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Thumpd3P97770 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Thumpd3P97770 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.33■■□□□ 1
Thumpd3P97770 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Thumpd3P97770 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Thumpd3P97770 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Thumpd3P97770 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Thumpd3P97770 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Thumpd3P97770 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Thumpd3P97770 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.31■■□□□ 1
Thumpd3P97770 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Thumpd3P97770 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.31■■□□□ 1
Thumpd3P97770 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Thumpd3P97770 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Thumpd3P97770 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.31■■□□□ 1
Thumpd3P97770 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Thumpd3P97770 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.3■■□□□ 1
Thumpd3P97770 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.3■■□□□ 1
Thumpd3P97770 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Thumpd3P97770 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.29■■□□□ 1
Thumpd3P97770 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Thumpd3P97770 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Thumpd3P97770 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.29■■□□□ 1
Thumpd3P97770 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Thumpd3P97770 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Thumpd3P97770 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Thumpd3P97770 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Thumpd3P97770 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Thumpd3P97770 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.28■■□□□ 1
Thumpd3P97770 Gm5921-201ENSMUST00000075898 882 ntBASIC21.28■■□□□ 1
Thumpd3P97770 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.28■■□□□ 1
Thumpd3P97770 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Thumpd3P97770 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.28■■□□□ 1
Thumpd3P97770 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms