Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.35■□□□□ 0.85
Cdx2P43241 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdx2P43241 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cdx2P43241 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdx2P43241 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdx2P43241 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cdx2P43241 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdx2P43241 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdx2P43241 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdx2P43241 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdx2P43241 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Cdx2P43241 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdx2P43241 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.33■□□□□ 0.85
Cdx2P43241 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cdx2P43241 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.33■□□□□ 0.85
Cdx2P43241 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cdx2P43241 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdx2P43241 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdx2P43241 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdx2P43241 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cdx2P43241 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdx2P43241 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdx2P43241 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdx2P43241 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.31■□□□□ 0.84
Cdx2P43241 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdx2P43241 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdx2P43241 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdx2P43241 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdx2P43241 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.3■□□□□ 0.84
Cdx2P43241 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdx2P43241 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Cdx2P43241 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdx2P43241 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.29■□□□□ 0.84
Cdx2P43241 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdx2P43241 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.29■□□□□ 0.84
Cdx2P43241 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdx2P43241 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.28■□□□□ 0.84
Cdx2P43241 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdx2P43241 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdx2P43241 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdx2P43241 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdx2P43241 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Cdx2P43241 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Cdx2P43241 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.27■□□□□ 0.84
Cdx2P43241 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdx2P43241 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.27■□□□□ 0.84
Cdx2P43241 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cdx2P43241 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.27■□□□□ 0.83
Cdx2P43241 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cdx2P43241 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdx2P43241 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdx2P43241 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.26■□□□□ 0.83
Cdx2P43241 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdx2P43241 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdx2P43241 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdx2P43241 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdx2P43241 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdx2P43241 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.25■□□□□ 0.83
Cdx2P43241 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cdx2P43241 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.25■□□□□ 0.83
Cdx2P43241 Gm9870-201ENSMUST00000063874 645 ntBASIC20.25■□□□□ 0.83
Cdx2P43241 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdx2P43241 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdx2P43241 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdx2P43241 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cdx2P43241 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.24■□□□□ 0.83
Cdx2P43241 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdx2P43241 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.24■□□□□ 0.83
Cdx2P43241 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdx2P43241 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdx2P43241 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdx2P43241 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cdx2P43241 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdx2P43241 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdx2P43241 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdx2P43241 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdx2P43241 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdx2P43241 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdx2P43241 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cdx2P43241 Gm8495-201ENSMUST00000188740 694 ntBASIC20.22■□□□□ 0.83
Cdx2P43241 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cdx2P43241 Gm6139-201ENSMUST00000079261 882 ntBASIC20.22■□□□□ 0.83
Cdx2P43241 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdx2P43241 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.22■□□□□ 0.83
Cdx2P43241 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdx2P43241 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdx2P43241 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Cdx2P43241 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cdx2P43241 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdx2P43241 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdx2P43241 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdx2P43241 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms