Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.61■□□□□ 0.41
Mmp9P41245 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp9P41245 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mmp9P41245 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp9P41245 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mmp9P41245 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Mmp9P41245 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.61■□□□□ 0.41
Mmp9P41245 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Mmp9P41245 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp9P41245 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp9P41245 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mmp9P41245 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp9P41245 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp9P41245 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Mmp9P41245 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp9P41245 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp9P41245 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp9P41245 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mmp9P41245 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp9P41245 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp9P41245 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp9P41245 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mmp9P41245 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.58■□□□□ 0.41
Mmp9P41245 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp9P41245 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp9P41245 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp9P41245 Gm6311-201ENSMUST00000073790 878 ntBASIC17.58■□□□□ 0.4
Mmp9P41245 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp9P41245 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp9P41245 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp9P41245 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Mmp9P41245 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp9P41245 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mmp9P41245 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Mmp9P41245 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Mmp9P41245 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.57■□□□□ 0.4
Mmp9P41245 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.57■□□□□ 0.4
Mmp9P41245 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mmp9P41245 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.56■□□□□ 0.4
Mmp9P41245 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Mmp9P41245 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.56■□□□□ 0.4
Mmp9P41245 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mmp9P41245 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp9P41245 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp9P41245 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp9P41245 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp9P41245 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp9P41245 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp9P41245 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp9P41245 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Mmp9P41245 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Mmp9P41245 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp9P41245 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp9P41245 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp9P41245 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp9P41245 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.54■□□□□ 0.4
Mmp9P41245 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp9P41245 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.54■□□□□ 0.4
Mmp9P41245 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mmp9P41245 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp9P41245 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp9P41245 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp9P41245 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.53■□□□□ 0.4
Mmp9P41245 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mmp9P41245 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.53■□□□□ 0.4
Mmp9P41245 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mmp9P41245 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp9P41245 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp9P41245 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp9P41245 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp9P41245 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp9P41245 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Mmp9P41245 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp9P41245 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp9P41245 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp9P41245 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp9P41245 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.52■□□□□ 0.4
Mmp9P41245 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp9P41245 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp9P41245 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.52■□□□□ 0.39
Mmp9P41245 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Mmp9P41245 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp9P41245 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp9P41245 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp9P41245 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Mmp9P41245 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp9P41245 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp9P41245 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp9P41245 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms