Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh4P39038 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Cdh4P39038 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh4P39038 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh4P39038 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh4P39038 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh4P39038 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh4P39038 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh4P39038 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.24■□□□□ 0.83
Cdh4P39038 Gm15820-201ENSMUST00000201566 728 ntBASIC20.24■□□□□ 0.83
Cdh4P39038 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.24■□□□□ 0.83
Cdh4P39038 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh4P39038 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cdh4P39038 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh4P39038 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cdh4P39038 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh4P39038 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh4P39038 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh4P39038 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh4P39038 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh4P39038 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh4P39038 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh4P39038 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.22■□□□□ 0.83
Cdh4P39038 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh4P39038 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh4P39038 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh4P39038 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh4P39038 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh4P39038 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh4P39038 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh4P39038 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.21■□□□□ 0.83
Cdh4P39038 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh4P39038 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh4P39038 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh4P39038 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh4P39038 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdh4P39038 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh4P39038 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh4P39038 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Cdh4P39038 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh4P39038 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cdh4P39038 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh4P39038 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh4P39038 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.19■□□□□ 0.82
Cdh4P39038 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh4P39038 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdh4P39038 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdh4P39038 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.18■□□□□ 0.82
Cdh4P39038 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cdh4P39038 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdh4P39038 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cdh4P39038 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh4P39038 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh4P39038 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh4P39038 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.16■□□□□ 0.82
Cdh4P39038 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh4P39038 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh4P39038 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh4P39038 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh4P39038 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cdh4P39038 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh4P39038 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.15■□□□□ 0.82
Cdh4P39038 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh4P39038 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.15■□□□□ 0.82
Cdh4P39038 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.14■□□□□ 0.82
Cdh4P39038 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cdh4P39038 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cdh4P39038 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh4P39038 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh4P39038 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.14■□□□□ 0.81
Cdh4P39038 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Cdh4P39038 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.14■□□□□ 0.81
Cdh4P39038 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh4P39038 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh4P39038 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh4P39038 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh4P39038 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh4P39038 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Cdh4P39038 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh4P39038 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh4P39038 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cdh4P39038 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh4P39038 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms