Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a1P31648 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Slc6a1P31648 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a1P31648 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a1P31648 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Slc6a1P31648 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.1■□□□□ 0.49
Slc6a1P31648 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a1P31648 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Slc6a1P31648 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.09■□□□□ 0.49
Slc6a1P31648 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a1P31648 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a1P31648 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a1P31648 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a1P31648 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a1P31648 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a1P31648 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a1P31648 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a1P31648 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a1P31648 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a1P31648 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a1P31648 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a1P31648 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc6a1P31648 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a1P31648 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc6a1P31648 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a1P31648 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Slc6a1P31648 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a1P31648 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Slc6a1P31648 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a1P31648 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slc6a1P31648 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Slc6a1P31648 Gm6311-201ENSMUST00000073790 878 ntBASIC18.06■□□□□ 0.48
Slc6a1P31648 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a1P31648 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a1P31648 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a1P31648 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Slc6a1P31648 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a1P31648 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a1P31648 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a1P31648 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a1P31648 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a1P31648 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a1P31648 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc6a1P31648 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a1P31648 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a1P31648 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc6a1P31648 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a1P31648 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.05■□□□□ 0.48
Slc6a1P31648 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a1P31648 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a1P31648 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a1P31648 Gm37136-201ENSMUST00000194368 194 ntBASIC18.04■□□□□ 0.48
Slc6a1P31648 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a1P31648 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Slc6a1P31648 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a1P31648 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Slc6a1P31648 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a1P31648 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a1P31648 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a1P31648 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a1P31648 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.03■□□□□ 0.48
Slc6a1P31648 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Slc6a1P31648 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.03■□□□□ 0.48
Slc6a1P31648 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a1P31648 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a1P31648 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a1P31648 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a1P31648 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Slc6a1P31648 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a1P31648 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.02■□□□□ 0.48
Slc6a1P31648 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a1P31648 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a1P31648 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a1P31648 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a1P31648 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a1P31648 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a1P31648 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a1P31648 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a1P31648 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a1P31648 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a1P31648 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a1P31648 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a1P31648 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc6a1P31648 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc6a1P31648 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc6a1P31648 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a1P31648 AC154454.1-201ENSMUST00000225253 216 ntBASIC18■□□□□ 0.47
Slc6a1P31648 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a1P31648 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a1P31648 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a1P31648 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc6a1P31648 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a1P31648 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms