Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccl3P10855 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccl3P10855 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.94■□□□□ 0.62
Ccl3P10855 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccl3P10855 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccl3P10855 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccl3P10855 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccl3P10855 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccl3P10855 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccl3P10855 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccl3P10855 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccl3P10855 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.92■□□□□ 0.62
Ccl3P10855 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccl3P10855 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccl3P10855 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccl3P10855 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.91■□□□□ 0.62
Ccl3P10855 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccl3P10855 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccl3P10855 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccl3P10855 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccl3P10855 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccl3P10855 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccl3P10855 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccl3P10855 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccl3P10855 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccl3P10855 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccl3P10855 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccl3P10855 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccl3P10855 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccl3P10855 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.88■□□□□ 0.61
Ccl3P10855 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ccl3P10855 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.88■□□□□ 0.61
Ccl3P10855 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccl3P10855 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl3P10855 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl3P10855 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.87■□□□□ 0.61
Ccl3P10855 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.87■□□□□ 0.61
Ccl3P10855 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.87■□□□□ 0.61
Ccl3P10855 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.87■□□□□ 0.61
Ccl3P10855 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.87■□□□□ 0.61
Ccl3P10855 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ccl3P10855 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl3P10855 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl3P10855 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccl3P10855 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccl3P10855 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccl3P10855 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccl3P10855 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccl3P10855 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccl3P10855 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccl3P10855 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccl3P10855 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccl3P10855 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.85■□□□□ 0.61
Ccl3P10855 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccl3P10855 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.85■□□□□ 0.61
Ccl3P10855 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl3P10855 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl3P10855 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccl3P10855 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ccl3P10855 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccl3P10855 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl3P10855 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccl3P10855 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccl3P10855 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccl3P10855 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Ccl3P10855 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ccl3P10855 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccl3P10855 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccl3P10855 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.83■□□□□ 0.6
Ccl3P10855 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccl3P10855 Gm9870-201ENSMUST00000063874 645 ntBASIC18.83■□□□□ 0.6
Ccl3P10855 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccl3P10855 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccl3P10855 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl3P10855 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl3P10855 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl3P10855 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccl3P10855 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl3P10855 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl3P10855 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl3P10855 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccl3P10855 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccl3P10855 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccl3P10855 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccl3P10855 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccl3P10855 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccl3P10855 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Ccl3P10855 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.79■□□□□ 0.6
Ccl3P10855 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccl3P10855 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms