Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.27■□□□□ 0.84
Sod1P08228 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sod1P08228 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Sod1P08228 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Sod1P08228 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sod1P08228 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sod1P08228 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.26■□□□□ 0.83
Sod1P08228 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sod1P08228 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sod1P08228 Serp2-204ENSMUST00000228055 705 ntBASIC20.25■□□□□ 0.83
Sod1P08228 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sod1P08228 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Sod1P08228 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sod1P08228 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sod1P08228 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.24■□□□□ 0.83
Sod1P08228 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sod1P08228 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sod1P08228 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sod1P08228 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sod1P08228 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sod1P08228 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.23■□□□□ 0.83
Sod1P08228 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sod1P08228 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sod1P08228 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sod1P08228 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sod1P08228 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sod1P08228 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sod1P08228 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.22■□□□□ 0.83
Sod1P08228 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sod1P08228 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.21■□□□□ 0.83
Sod1P08228 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sod1P08228 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sod1P08228 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sod1P08228 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.21■□□□□ 0.83
Sod1P08228 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Sod1P08228 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sod1P08228 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sod1P08228 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sod1P08228 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.2■□□□□ 0.82
Sod1P08228 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sod1P08228 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sod1P08228 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sod1P08228 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sod1P08228 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sod1P08228 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sod1P08228 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sod1P08228 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sod1P08228 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.19■□□□□ 0.82
Sod1P08228 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sod1P08228 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.19■□□□□ 0.82
Sod1P08228 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sod1P08228 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sod1P08228 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sod1P08228 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sod1P08228 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sod1P08228 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sod1P08228 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sod1P08228 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sod1P08228 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sod1P08228 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sod1P08228 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sod1P08228 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sod1P08228 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sod1P08228 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sod1P08228 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.16■□□□□ 0.82
Sod1P08228 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 Gm9870-201ENSMUST00000063874 645 ntBASIC20.16■□□□□ 0.82
Sod1P08228 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Sod1P08228 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sod1P08228 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.15■□□□□ 0.82
Sod1P08228 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sod1P08228 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sod1P08228 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Sod1P08228 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sod1P08228 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.14■□□□□ 0.81
Sod1P08228 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sod1P08228 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sod1P08228 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Sod1P08228 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sod1P08228 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sod1P08228 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.13■□□□□ 0.81
Sod1P08228 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.13■□□□□ 0.81
Sod1P08228 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sod1P08228 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sod1P08228 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sod1P08228 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.12■□□□□ 0.81
Sod1P08228 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Sod1P08228 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sod1P08228 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sod1P08228 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sod1P08228 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sod1P08228 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sod1P08228 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms