Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Best1O88870 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Best1O88870 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Best1O88870 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Best1O88870 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Best1O88870 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Best1O88870 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Best1O88870 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Best1O88870 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Best1O88870 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Best1O88870 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Best1O88870 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Best1O88870 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Best1O88870 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.53■□□□□ 0.88
Best1O88870 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Best1O88870 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Best1O88870 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Best1O88870 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Best1O88870 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.52■□□□□ 0.88
Best1O88870 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.52■□□□□ 0.88
Best1O88870 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Best1O88870 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Best1O88870 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Best1O88870 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Best1O88870 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Best1O88870 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Best1O88870 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Best1O88870 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Best1O88870 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Best1O88870 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Best1O88870 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Best1O88870 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Best1O88870 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Best1O88870 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Best1O88870 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Best1O88870 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Best1O88870 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Best1O88870 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Best1O88870 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Best1O88870 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Best1O88870 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.5■□□□□ 0.87
Best1O88870 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Best1O88870 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Best1O88870 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Best1O88870 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Best1O88870 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Best1O88870 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Best1O88870 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Best1O88870 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
Best1O88870 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Best1O88870 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Best1O88870 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Best1O88870 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Best1O88870 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Best1O88870 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Best1O88870 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Best1O88870 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Best1O88870 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Best1O88870 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.47■□□□□ 0.87
Best1O88870 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Best1O88870 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.47■□□□□ 0.87
Best1O88870 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.47■□□□□ 0.87
Best1O88870 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Best1O88870 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Best1O88870 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Best1O88870 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Best1O88870 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Best1O88870 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.46■□□□□ 0.87
Best1O88870 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Best1O88870 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Best1O88870 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Best1O88870 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Best1O88870 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Best1O88870 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Best1O88870 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Best1O88870 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Best1O88870 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.45■□□□□ 0.86
Best1O88870 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Best1O88870 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Best1O88870 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Best1O88870 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Best1O88870 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Best1O88870 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Best1O88870 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Best1O88870 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Best1O88870 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Best1O88870 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Best1O88870 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Best1O88870 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Best1O88870 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Best1O88870 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Best1O88870 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms