Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn1O88551 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn1O88551 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn1O88551 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn1O88551 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn1O88551 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn1O88551 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn1O88551 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn1O88551 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cldn1O88551 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
Cldn1O88551 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.05■□□□□ 0.48
Cldn1O88551 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.05■□□□□ 0.48
Cldn1O88551 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.05■□□□□ 0.48
Cldn1O88551 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cldn1O88551 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cldn1O88551 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cldn1O88551 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.03■□□□□ 0.48
Cldn1O88551 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn1O88551 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cldn1O88551 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn1O88551 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn1O88551 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn1O88551 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cldn1O88551 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.03■□□□□ 0.48
Cldn1O88551 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.03■□□□□ 0.48
Cldn1O88551 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn1O88551 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn1O88551 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn1O88551 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cldn1O88551 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn1O88551 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn1O88551 Gm18284-201ENSMUST00000172604 624 ntBASIC18.02■□□□□ 0.48
Cldn1O88551 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Cldn1O88551 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn1O88551 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cldn1O88551 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn1O88551 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cldn1O88551 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn1O88551 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.01■□□□□ 0.47
Cldn1O88551 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn1O88551 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn1O88551 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn1O88551 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn1O88551 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn1O88551 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn1O88551 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cldn1O88551 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn1O88551 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn1O88551 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cldn1O88551 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18■□□□□ 0.47
Cldn1O88551 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn1O88551 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn1O88551 Nsd1-206ENSMUST00000224918 1001 ntBASIC18■□□□□ 0.47
Cldn1O88551 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cldn1O88551 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cldn1O88551 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cldn1O88551 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn1O88551 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn1O88551 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn1O88551 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Cldn1O88551 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.99■□□□□ 0.47
Cldn1O88551 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn1O88551 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
Cldn1O88551 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cldn1O88551 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.98■□□□□ 0.47
Cldn1O88551 Gm29257-201ENSMUST00000186115 639 ntBASIC17.98■□□□□ 0.47
Cldn1O88551 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cldn1O88551 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cldn1O88551 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.98■□□□□ 0.47
Cldn1O88551 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn1O88551 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cldn1O88551 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn1O88551 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn1O88551 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn1O88551 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn1O88551 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Cldn1O88551 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn1O88551 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn1O88551 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn1O88551 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn1O88551 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn1O88551 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms