Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alx4O35137 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Alx4O35137 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Alx4O35137 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.88■□□□□ 0.61
Alx4O35137 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.88■□□□□ 0.61
Alx4O35137 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.88■□□□□ 0.61
Alx4O35137 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alx4O35137 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Alx4O35137 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx4O35137 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alx4O35137 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx4O35137 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Alx4O35137 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx4O35137 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx4O35137 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alx4O35137 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx4O35137 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx4O35137 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx4O35137 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx4O35137 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx4O35137 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Alx4O35137 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Alx4O35137 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Alx4O35137 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx4O35137 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx4O35137 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx4O35137 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.84■□□□□ 0.61
Alx4O35137 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.84■□□□□ 0.61
Alx4O35137 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alx4O35137 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.84■□□□□ 0.61
Alx4O35137 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Alx4O35137 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Alx4O35137 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Alx4O35137 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Alx4O35137 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx4O35137 Gm6311-201ENSMUST00000073790 878 ntBASIC18.83■□□□□ 0.6
Alx4O35137 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Alx4O35137 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx4O35137 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Alx4O35137 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alx4O35137 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx4O35137 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx4O35137 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.82■□□□□ 0.6
Alx4O35137 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx4O35137 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx4O35137 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.82■□□□□ 0.6
Alx4O35137 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx4O35137 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alx4O35137 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Alx4O35137 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Alx4O35137 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.81■□□□□ 0.6
Alx4O35137 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Alx4O35137 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.81■□□□□ 0.6
Alx4O35137 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Alx4O35137 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Alx4O35137 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Alx4O35137 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
Alx4O35137 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Alx4O35137 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Alx4O35137 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Alx4O35137 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.8■□□□□ 0.6
Alx4O35137 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Alx4O35137 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alx4O35137 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Alx4O35137 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alx4O35137 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Alx4O35137 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.79■□□□□ 0.6
Alx4O35137 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Alx4O35137 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.79■□□□□ 0.6
Alx4O35137 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.79■□□□□ 0.6
Alx4O35137 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Alx4O35137 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alx4O35137 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alx4O35137 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Alx4O35137 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Alx4O35137 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Alx4O35137 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.78■□□□□ 0.6
Alx4O35137 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Alx4O35137 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Alx4O35137 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx4O35137 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.78■□□□□ 0.6
Alx4O35137 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Alx4O35137 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alx4O35137 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Alx4O35137 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Alx4O35137 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.77■□□□□ 0.59
Alx4O35137 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Alx4O35137 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
Alx4O35137 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx4O35137 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx4O35137 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 233.5 ms