Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.4■□□□□ 0.7
Hps1O08983 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps1O08983 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps1O08983 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hps1O08983 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hps1O08983 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hps1O08983 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hps1O08983 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hps1O08983 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hps1O08983 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hps1O08983 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.38■□□□□ 0.69
Hps1O08983 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hps1O08983 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.38■□□□□ 0.69
Hps1O08983 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.38■□□□□ 0.69
Hps1O08983 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hps1O08983 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hps1O08983 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hps1O08983 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hps1O08983 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hps1O08983 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hps1O08983 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hps1O08983 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hps1O08983 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hps1O08983 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hps1O08983 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hps1O08983 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Hps1O08983 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hps1O08983 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Hps1O08983 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.36■□□□□ 0.69
Hps1O08983 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hps1O08983 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hps1O08983 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.36■□□□□ 0.69
Hps1O08983 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hps1O08983 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hps1O08983 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hps1O08983 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hps1O08983 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hps1O08983 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.36■□□□□ 0.69
Hps1O08983 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.36■□□□□ 0.69
Hps1O08983 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hps1O08983 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.35■□□□□ 0.69
Hps1O08983 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hps1O08983 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.35■□□□□ 0.69
Hps1O08983 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.35■□□□□ 0.69
Hps1O08983 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hps1O08983 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hps1O08983 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hps1O08983 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Hps1O08983 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hps1O08983 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.34■□□□□ 0.69
Hps1O08983 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hps1O08983 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hps1O08983 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hps1O08983 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Hps1O08983 Terc-201ENSMUST00000082862 423 ntBASIC19.33■□□□□ 0.68
Hps1O08983 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hps1O08983 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hps1O08983 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hps1O08983 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hps1O08983 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hps1O08983 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.32■□□□□ 0.68
Hps1O08983 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hps1O08983 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hps1O08983 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Hps1O08983 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hps1O08983 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Hps1O08983 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hps1O08983 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hps1O08983 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hps1O08983 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hps1O08983 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hps1O08983 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Hps1O08983 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hps1O08983 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hps1O08983 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps1O08983 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps1O08983 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps1O08983 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.3■□□□□ 0.68
Hps1O08983 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Hps1O08983 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps1O08983 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hps1O08983 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Hps1O08983 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.3■□□□□ 0.68
Hps1O08983 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps1O08983 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hps1O08983 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Hps1O08983 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hps1O08983 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hps1O08983 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps1O08983 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps1O08983 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps1O08983 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps1O08983 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.28■□□□□ 0.68
Hps1O08983 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hps1O08983 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.28■□□□□ 0.68
Hps1O08983 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hps1O08983 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hps1O08983 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hps1O08983 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hps1O08983 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms