Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa8J3QNX5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa8J3QNX5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa8J3QNX5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa8J3QNX5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa8J3QNX5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa8J3QNX5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa8J3QNX5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa8J3QNX5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa8J3QNX5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa8J3QNX5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.23■□□□□ 0.67
Shisa8J3QNX5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa8J3QNX5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa8J3QNX5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Gm7432-201ENSMUST00000210343 879 ntBASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa8J3QNX5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Gm11599-201ENSMUST00000118720 878 ntBASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa8J3QNX5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa8J3QNX5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa8J3QNX5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa8J3QNX5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa8J3QNX5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa8J3QNX5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa8J3QNX5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa8J3QNX5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shisa8J3QNX5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.19■□□□□ 0.66
Shisa8J3QNX5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.19■□□□□ 0.66
Shisa8J3QNX5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shisa8J3QNX5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.19■□□□□ 0.66
Shisa8J3QNX5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Shisa8J3QNX5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Shisa8J3QNX5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shisa8J3QNX5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Shisa8J3QNX5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Shisa8J3QNX5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Shisa8J3QNX5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Shisa8J3QNX5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa8J3QNX5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Shisa8J3QNX5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Shisa8J3QNX5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa8J3QNX5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa8J3QNX5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Shisa8J3QNX5 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa8J3QNX5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Shisa8J3QNX5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Shisa8J3QNX5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Shisa8J3QNX5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shisa8J3QNX5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shisa8J3QNX5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shisa8J3QNX5 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.14■□□□□ 0.65
Shisa8J3QNX5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Shisa8J3QNX5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shisa8J3QNX5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Shisa8J3QNX5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shisa8J3QNX5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shisa8J3QNX5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shisa8J3QNX5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms