Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28729A0A1B0GSW2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28729A0A1B0GSW2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Gm28729A0A1B0GSW2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28729A0A1B0GSW2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28729A0A1B0GSW2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.91■□□□□ 0.94
Gm28729A0A1B0GSW2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28729A0A1B0GSW2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.91■□□□□ 0.94
Gm28729A0A1B0GSW2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.91■□□□□ 0.94
Gm28729A0A1B0GSW2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.91■□□□□ 0.94
Gm28729A0A1B0GSW2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28729A0A1B0GSW2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28729A0A1B0GSW2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28729A0A1B0GSW2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28729A0A1B0GSW2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm28729A0A1B0GSW2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28729A0A1B0GSW2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28729A0A1B0GSW2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Gm28729A0A1B0GSW2 Golgb1-201ENSMUST00000023534 498 ntBASIC20.89■□□□□ 0.93
Gm28729A0A1B0GSW2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28729A0A1B0GSW2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.89■□□□□ 0.93
Gm28729A0A1B0GSW2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Gm28729A0A1B0GSW2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28729A0A1B0GSW2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.88■□□□□ 0.93
Gm28729A0A1B0GSW2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28729A0A1B0GSW2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Gm28729A0A1B0GSW2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28729A0A1B0GSW2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Gm28729A0A1B0GSW2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28729A0A1B0GSW2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28729A0A1B0GSW2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28729A0A1B0GSW2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28729A0A1B0GSW2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Gm28729A0A1B0GSW2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Gm28729A0A1B0GSW2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28729A0A1B0GSW2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28729A0A1B0GSW2 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.85■□□□□ 0.93
Gm28729A0A1B0GSW2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28729A0A1B0GSW2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28729A0A1B0GSW2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Gm28729A0A1B0GSW2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Gm27454-201ENSMUST00000185090 204 ntBASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28729A0A1B0GSW2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.83■□□□□ 0.93
Gm28729A0A1B0GSW2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
Gm28729A0A1B0GSW2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm28729A0A1B0GSW2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gm28729A0A1B0GSW2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28729A0A1B0GSW2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28729A0A1B0GSW2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28729A0A1B0GSW2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28729A0A1B0GSW2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gm28729A0A1B0GSW2 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.81■□□□□ 0.92
Gm28729A0A1B0GSW2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28729A0A1B0GSW2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28729A0A1B0GSW2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28729A0A1B0GSW2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28729A0A1B0GSW2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28729A0A1B0GSW2 Gm45417-201ENSMUST00000209533 758 ntBASIC20.8■□□□□ 0.92
Gm28729A0A1B0GSW2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28729A0A1B0GSW2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Gm28729A0A1B0GSW2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28729A0A1B0GSW2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28729A0A1B0GSW2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28729A0A1B0GSW2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.79■□□□□ 0.92
Gm28729A0A1B0GSW2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28729A0A1B0GSW2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28729A0A1B0GSW2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28729A0A1B0GSW2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 146.7 ms