Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lnp1A0A1B0GSK3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lnp1A0A1B0GSK3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lnp1A0A1B0GSK3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lnp1A0A1B0GSK3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Lnp1A0A1B0GSK3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lnp1A0A1B0GSK3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.58■□□□□ 0.4
Lnp1A0A1B0GSK3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lnp1A0A1B0GSK3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lnp1A0A1B0GSK3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lnp1A0A1B0GSK3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lnp1A0A1B0GSK3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lnp1A0A1B0GSK3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lnp1A0A1B0GSK3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lnp1A0A1B0GSK3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lnp1A0A1B0GSK3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lnp1A0A1B0GSK3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms